RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	LOC107986453	A0A1B0GWG9	222 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298		H3BMG7	143 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	BUB1B-PAK6	H3BSN5	160 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TMEM256-PLSCR3	K7ERE1	68 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PLA2G10	O15496	165 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	CST7	O76096	145 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LTA	P01374	205 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	CXCL1	P09341	107 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LINC00032	P0C843	101 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	SCGB1C2	P0DMR2	95 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LGALS3	P17931	250 aa	Known RBP	2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	YPEL3	P61236	119 aa	Predicted RBP	2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	CRADD	P78560	199 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	FOXF1	Q12946	379 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298		Q56UQ5	140 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	COA6	Q5JTJ3	125 aa	Known RBP	2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TEN1	Q86WV5	123 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	RNF182	Q8N6D2	247 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	OR4B1	Q8NGF8	309 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	OR4X2	Q8NGF9	303 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	ATP6V0E2	Q8NHE4	81 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	SCGB1C1	Q8TD33	95 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	C2orf15	Q8WU43	125 aa	Known RBP	2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TSLP	Q969D9	159 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TIMM17A	Q99595	171 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PKMYT1	Q99640	499 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	HTT	P42858	3142 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	KIF26A	Q9ULI4	1882 aa	Predicted RBP	2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	COL1A2	P08123	1366 aa		2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	COL4A4	P53420	1690 aa	Predicted RBP	2.73	□□□□□ -1.97
CTNNA1-238	ENST00000523298	IGLV3-16	A0A075B6K0	115 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	MUC21	A0A0G2JKD1	596 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TRBV27	A0A0K0K1C4	114 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	OOSP1	A8MZH6	123 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298		M0R2P5	195 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	SFT2D2	O95562	160 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	SLC25A5	P05141	298 aa	Known RBP	2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	HLA-DRB4	P13762	266 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	SNCA	P37840	140 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PLXNA3	P51805	1871 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	SPRN	Q5BIV9	151 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PHF5A	Q7RTV0	110 aa	Known RBP	2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	GPHB5	Q86YW7	130 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	ZNF555	Q8NEP9	628 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	OR10P1	Q8NGE3	313 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	OR5D16	Q8NGK9	328 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LSM10	Q969L4	123 aa	Known RBP	2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	AQP10	Q96PS8	301 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	SHANK2-AS3	Q9BTD1	123 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	LCE3D	Q9BYE3	92 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PARP12	Q9H0J9	701 aa	Known RBP	2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PLEKHF2	Q9H8W4	249 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	BRWD1	Q9NSI6	2320 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PRO0461	Q9UI25	63 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	TPRKB	Q9Y3C4	175 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298		Q9Y3F1	56 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	HLA-DRB4	X5D2U9	266 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	PRRC2B	Q5JSZ5	2229 aa	Known RBP	2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	ATG2B	Q96BY7	2078 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	DNAH12	Q6ZR08	3092 aa		2.72	□□□□□ -1.97
CTNNA1-238	ENST00000523298	MYO16	Q9Y6X6	1858 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	TNRC18	O15417	2968 aa	Predicted RBP	2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	IGLV4-69	A0A075B6H9	119 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	TRBV20-1	A0A075B6N2	111 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298		A0A087WXM4	84 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	IGKV1-9	A0A0C4DH69	117 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298		A0A1B0GVX0	72 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	NDUFC2-KCTD14	E9PQ53	114 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	NDUFB3	O43676	98 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	SYNGR2	O43760	224 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	PITX3	O75364	302 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	NDUFB6	O95139	128 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	UBL3	O95164	117 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	NDUFB2	O95178	105 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	C1QA	P02745	245 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	HLA-DPB1	P04440	258 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	SRP19	P09132	144 aa	Known RBP	2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	ZNF705D	P0CH99	300 aa	Predicted RBP	2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	SLC25A6	P12236	298 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	ADCYAP1	P18509	176 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	KRTAP10-8	P60410	259 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	ATP5G2	Q06055	141 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	DEFB116	Q30KQ4	102 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	LGALS9B	Q3B8N2	356 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	TMEM91	Q6ZNR0	172 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	OR10G2	Q8NGC3	310 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	OR5H2	Q8NGV7	314 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	RNASE6	Q93091	150 aa	Known RBP	2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	POP5	Q969H6	163 aa	Known RBP	2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	RAB37	Q96AX2	223 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	SLC25A2	Q9BXI2	301 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	ZNF286A	Q9HBT8	521 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	FAM60A	Q9NP50	221 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	LSM2	Q9Y333	95 aa	Known RBP	2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	SERP1	Q9Y6X1	66 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	MYOF	Q9NZM1	2061 aa		2.71	□□□□□ -1.98
CTNNA1-238	ENST00000523298	IGLV11-55	A0A075B6I3	123 aa		2.7	□□□□□ -1.98
CTNNA1-238	ENST00000523298	TRGV5	A0A0B4J1U4	118 aa		2.7	□□□□□ -1.98
CTNNA1-238	ENST00000523298	IGKV6-21	A0A0C4DH24	114 aa		2.7	□□□□□ -1.98
CTNNA1-238	ENST00000523298	MCRIP1	C9JLW8	97 aa		2.7	□□□□□ -1.98

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