RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 F8P00451 2351 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 ABCA4P78363 2273 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 CTTNBP2Q8WZ74 1663 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 RPL37AP61513 92 aaKnown RBP0.06□□□□□ -2.4
PCM1-217ENST00000522998 MRPS36P82909 103 aaKnown RBP0.06□□□□□ -2.4
PCM1-217ENST00000522998 SMIM20Q8N5G0 67 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 AP3S1Q92572 193 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 DIRC1Q969H9 104 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 MCEEQ96PE7 176 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 EFCAB11Q9BUY7 163 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 TAF9BQ9HBM6 251 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 OTORQ9NRC9 128 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 STOML2Q9UJZ1 356 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 TPRKBQ9Y3C4 175 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 ABCA12Q86UK0 2595 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 MED13LQ71F56 2210 aa0.06□□□□□ -2.4
PCM1-217ENST00000522998 OTOGQ6ZRI0 2925 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 H3BQV1 296 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 KPNA4O00629 521 aaPredicted RBP0.05□□□□□ -2.4
PCM1-217ENST00000522998 KDELR1P24390 212 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 GLRXP35754 106 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 VMA21Q3ZAQ7 101 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 Q86TA4 180 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 GRPEL2Q8TAA5 225 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 OR4C12Q96R67 309 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 BOLA2Q9H3K6 86 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 LRTM1Q9HBL6 345 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 UFC1Q9Y3C8 167 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 NUBP2Q9Y5Y2 271 aa0.05□□□□□ -2.4
PCM1-217ENST00000522998 TRAPPC8Q9Y2L5 1435 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 JMJD1CQ15652 2540 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 NCOR2Q9Y618 2525 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 FABP4P15090 132 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 CAV3P56539 151 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 TCTAP57738 103 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 TAS2R41P59536 307 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 IZUMO2Q6UXV1 221 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 STX19Q8N4C7 294 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 NEK7Q8TDX7 302 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 TSKUQ8WUA8 353 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 BORCS8Q96FH0 119 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 NAT8BQ9UHF3 227 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 BCORL1Q5H9F3 1711 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 FSIP2Q5CZC0 6907 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 TTC28Q96AY4 2481 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 YTHDC2Q9H6S0 1430 aaKnown RBP0.04□□□□□ -2.4
PCM1-217ENST00000522998 PIEZO1Q92508 2521 aa0.04□□□□□ -2.4
PCM1-217ENST00000522998 MYH1P12882 1939 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 ZCCHC11Q5TAX3 1644 aaKnown RBP0.03□□□□□ -2.4
PCM1-217ENST00000522998 USP54Q70EL1 1684 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 SULT1C4O75897 302 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 TRACP01848 142 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 MT-ND6P03923 174 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 XAF1Q6GPH4 301 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 SPINK6Q6UWN8 80 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 DEFB132Q7Z7B7 95 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 C5orf17Q8NAS9 161 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 OR4B1Q8NGF8 309 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 ISOC1Q96CN7 298 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 NABP2Q9BQ15 211 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 LPAR5Q9H1C0 372 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 BIN3Q9NQY0 253 aa0.03□□□□□ -2.4
PCM1-217ENST00000522998 AFDNP55196 1824 aaKnown RBP0.03□□□□□ -2.4
PCM1-217ENST00000522998 TECPR2O15040 1411 aa0.03□□□□□ -2.41
PCM1-217ENST00000522998 TRDV1A0A1B0GX56 115 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 TMEM238C9JI98 176 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 H7BYZ3 331 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 GYPBP06028 91 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 CRYBA4P53673 196 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 BASP1P80723 227 aaKnown RBP0.02□□□□□ -2.41
PCM1-217ENST00000522998 QRFPP83859 136 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 NEDD8Q15843 81 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 SPINK13Q1W4C9 94 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 ASB16-AS1Q495Z4 193 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 CASC2Q6XLA1 102 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 FAM24BQ8N5W8 94 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 CIB3Q96Q77 187 aaPredicted RBP0.02□□□□□ -2.41
PCM1-217ENST00000522998 MED11Q9P086 117 aa0.02□□□□□ -2.41
PCM1-217ENST00000522998 HRNRQ86YZ3 2850 aaPredicted RBP0.02□□□□□ -2.41
PCM1-217ENST00000522998 FER1L6Q2WGJ9 1857 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 PPP5D1E7EU14 171 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 BCL2P10415 239 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 NDUFA6P56556 154 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 RPL37P61927 97 aaKnown RBP0.01□□□□□ -2.41
PCM1-217ENST00000522998 CCSMST1Q4G0I0 132 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 GLYATL3Q5SZD4 288 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 TMEM78Q5T7P6 136 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 CROCCP2Q86T23 111 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 TMEM229BQ8NBD8 167 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 OR5H6Q8NGV6 325 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 OR5AK2Q8NH90 309 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 HOPXQ9BPY8 73 aaPredicted RBP0.01□□□□□ -2.41
PCM1-217ENST00000522998 SYNMO15061 1565 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 CADP27708 2225 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 CACNA1CQ13936 2221 aa0.01□□□□□ -2.41
PCM1-217ENST00000522998 TRBV27A0A0K0K1C4 114 aa0□□□□□ -2.41
PCM1-217ENST00000522998 NBDYA0A0U1RRE5 68 aa0□□□□□ -2.41
PCM1-217ENST00000522998 C3orf85A0A1B0GTC6 90 aa0□□□□□ -2.41
PCM1-217ENST00000522998 MAP1LC3B2A6NCE7 125 aa0□□□□□ -2.41
PCM1-217ENST00000522998 GABARAPH6UMI1 98 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms