RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 WFDC1Q9HC57 220 aa13.1□□□□□ -0.31
SPIDR-220ENST00000522900 MBD2Q9UBB5 411 aa13.1□□□□□ -0.31
SPIDR-220ENST00000522900 GAGE12BA1L429 117 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 C7orf71A4D174 169 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 KLLNB2CW77 178 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 C17orf112F2Z3M2 114 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 ZNF324O75467 553 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-220ENST00000522900 GAGE7O76087 117 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 NUDT3O95989 172 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 SLC25A5P05141 298 aaKnown RBP13.09□□□□□ -0.31
SPIDR-220ENST00000522900 GAGE12FP0CL80 117 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 GAGE12GP0CL81 117 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 GAGE12IP0CL82 117 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 BTN1A1Q13410 526 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 FFAR4Q5NUL3 377 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 Q6ZR54 194 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 LINC00612Q8N6U2 182 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 PHYHIPLQ96FC7 376 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 MRPL32Q9BYC8 188 aaKnown RBP13.09□□□□□ -0.31
SPIDR-220ENST00000522900 KCNIP2Q9NS61 270 aa13.09□□□□□ -0.31
SPIDR-220ENST00000522900 EIF3GO75821 320 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPIDR-220ENST00000522900 PET100P0DJ07 73 aa13.08□□□□□ -0.32
SPIDR-220ENST00000522900 RNASE4P34096 147 aaKnown RBP13.08□□□□□ -0.32
SPIDR-220ENST00000522900 Q6ZQT7 251 aa13.08□□□□□ -0.32
SPIDR-220ENST00000522900 C9orf47Q6ZRZ4 202 aa13.08□□□□□ -0.32
SPIDR-220ENST00000522900 LINC00336Q6ZUF6 198 aa13.08□□□□□ -0.32
SPIDR-220ENST00000522900 PYGO2Q9BRQ0 406 aa13.08□□□□□ -0.32
SPIDR-220ENST00000522900 PRR9Q5T870 116 aa13.07□□□□□ -0.32
SPIDR-220ENST00000522900 SCGB1C1Q8TD33 95 aa13.07□□□□□ -0.32
SPIDR-220ENST00000522900 ALG5Q9Y673 324 aa13.07□□□□□ -0.32
SPIDR-220ENST00000522900 HECTD4Q9Y4D8 3996 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 DNAH2Q9P225 4427 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 A0A1B0GVY2 172 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 SNURFLB1AK76 121 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 OR7C2O60412 319 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 IFNA5P01569 189 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 CRISP2P16562 243 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 HOXA5P20719 270 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 RANP62826 216 aaKnown RBP13.06□□□□□ -0.32
SPIDR-220ENST00000522900 ZFAND2AQ8N6M9 145 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 DNAH17Q9UFH2 4485 aa13.06□□□□□ -0.32
SPIDR-220ENST00000522900 GPX1P07203 203 aa13.05□□□□□ -0.32
SPIDR-220ENST00000522900 DAZ2Q13117 558 aaKnown RBP13.05□□□□□ -0.32
SPIDR-220ENST00000522900 OR5I1Q13606 314 aa13.05□□□□□ -0.32
SPIDR-220ENST00000522900 TMEM78Q5T7P6 136 aa13.05□□□□□ -0.32
SPIDR-220ENST00000522900 Q6ZTI0 123 aa13.05□□□□□ -0.32
SPIDR-220ENST00000522900 C11orf72Q8NBR9 251 aa13.05□□□□□ -0.32
SPIDR-220ENST00000522900 ATG101Q9BSB4 218 aa13.05□□□□□ -0.32
SPIDR-220ENST00000522900 GSN-AS1Q9NRJ2 163 aa13.05□□□□□ -0.32
SPIDR-220ENST00000522900 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
SPIDR-220ENST00000522900 PRSS29PA6NIE9 313 aa13.04□□□□□ -0.32
SPIDR-220ENST00000522900 Q8TAT8 98 aa13.04□□□□□ -0.32
SPIDR-220ENST00000522900 LINC00467Q9BRT7 94 aa13.04□□□□□ -0.32
SPIDR-220ENST00000522900 Q9H3A6 140 aa13.04□□□□□ -0.32
SPIDR-220ENST00000522900 TRAV26-1A0A087WT03 109 aa13.03□□□□□ -0.32
SPIDR-220ENST00000522900 A0A0J9YY99 117 aa13.03□□□□□ -0.32
SPIDR-220ENST00000522900 NMBP08949 121 aa13.03□□□□□ -0.32
SPIDR-220ENST00000522900 ZNF138P52744 262 aa13.03□□□□□ -0.32
SPIDR-220ENST00000522900 UBE2L3P68036 154 aaKnown RBP13.03□□□□□ -0.32
SPIDR-220ENST00000522900 EIF4E3Q8N5X7 224 aaKnown RBP13.03□□□□□ -0.32
SPIDR-220ENST00000522900 TMPRSS5Q9H3S3 457 aa13.03□□□□□ -0.32
SPIDR-220ENST00000522900 TP53TG3Q9ULZ0 132 aa13.03□□□□□ -0.32
SPIDR-220ENST00000522900 LINC00588Q9Y4M8 146 aa13.03□□□□□ -0.32
SPIDR-220ENST00000522900 KLF12Q9Y4X4 402 aa13.03□□□□□ -0.32
SPIDR-220ENST00000522900 FAM3BP58499 235 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-220ENST00000522900 ANXA2RQ3ZCQ2 193 aa13.02□□□□□ -0.33
SPIDR-220ENST00000522900 ZNRF2Q8NHG8 242 aa13.02□□□□□ -0.33
SPIDR-220ENST00000522900 HERC2O95714 4834 aa13.02□□□□□ -0.33
SPIDR-220ENST00000522900 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.33
SPIDR-220ENST00000522900 M6PRP20645 277 aa13.01□□□□□ -0.33
SPIDR-220ENST00000522900 KHDC3LQ587J8 217 aa13.01□□□□□ -0.33
SPIDR-220ENST00000522900 LYPD1Q8N2G4 141 aa13.01□□□□□ -0.33
SPIDR-220ENST00000522900 RXFP4Q8TDU9 374 aa13.01□□□□□ -0.33
SPIDR-220ENST00000522900 GNPNAT1Q96EK6 184 aaPredicted RBP13.01□□□□□ -0.33
SPIDR-220ENST00000522900 NACAE9PAV3 2078 aa13.01□□□□□ -0.33
SPIDR-220ENST00000522900 KIAA1109Q2LD37 5005 aa13□□□□□ -0.33
SPIDR-220ENST00000522900 PTTG1O95997 202 aa13□□□□□ -0.33
SPIDR-220ENST00000522900 CSN1S1P47710 185 aa13□□□□□ -0.33
SPIDR-220ENST00000522900 RAB2AP61019 212 aa13□□□□□ -0.33
SPIDR-220ENST00000522900 Q5BKY6 102 aa13□□□□□ -0.33
SPIDR-220ENST00000522900 ZNF680Q8NEM1 530 aa13□□□□□ -0.33
SPIDR-220ENST00000522900 TRGV1A0A0A0MS02 117 aa12.99□□□□□ -0.33
SPIDR-220ENST00000522900 DIRC3C9JPN6 131 aa12.99□□□□□ -0.33
SPIDR-220ENST00000522900 RGS13O14921 159 aa12.99□□□□□ -0.33
SPIDR-220ENST00000522900 HMGB3O15347 200 aaKnown RBP12.99□□□□□ -0.33
SPIDR-220ENST00000522900 CCL18P55774 89 aa12.99□□□□□ -0.33
SPIDR-220ENST00000522900 TAS2R45P59539 299 aa12.99□□□□□ -0.33
SPIDR-220ENST00000522900 ACOT6Q3I5F7 207 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-220ENST00000522900 HYLS1Q96M11 299 aa12.99□□□□□ -0.33
SPIDR-220ENST00000522900 MED28Q9H204 178 aa12.99□□□□□ -0.33
SPIDR-220ENST00000522900 TRGV2A0A075B6R0 118 aa12.98□□□□□ -0.33
SPIDR-220ENST00000522900 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
SPIDR-220ENST00000522900 RBAKDNA6NC62 111 aa12.98□□□□□ -0.33
SPIDR-220ENST00000522900 PGPA6NDG6 321 aa12.98□□□□□ -0.33
SPIDR-220ENST00000522900 SPINK4O60575 86 aa12.98□□□□□ -0.33
SPIDR-220ENST00000522900 TCL1AP56279 114 aa12.98□□□□□ -0.33
SPIDR-220ENST00000522900 C1orf134Q5TEV5 83 aa12.98□□□□□ -0.33
SPIDR-220ENST00000522900 SSX7Q7RTT5 188 aa12.98□□□□□ -0.33
SPIDR-220ENST00000522900 TRBV7-9A0A0J9YWB2 115 aa12.97□□□□□ -0.33
SPIDR-220ENST00000522900 NBDYA0A0U1RRE5 68 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms