RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 TEX49A0A1B0GTD5 131 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 LINC00473A8K010 186 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 LYRM9A8MSI8 78 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 MRPS12O15235 138 aaKnown RBP4.04□□□□□ -1.76
NPM1-207ENST00000521260 FOXS1O43638 330 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 CXCL13O43927 109 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 CDAP32320 146 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 LAGE3Q14657 143 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 SDIM1Q6ZPB5 146 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 RNF144BQ7Z419 303 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 VN1R4Q7Z5H5 301 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 LINC00311Q8N616 119 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 NUP37Q8NFH4 326 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 OVOL2Q9BRP0 275 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 PHPT1Q9NRX4 125 aaPredicted RBP4.04□□□□□ -1.76
NPM1-207ENST00000521260 RNF181Q9P0P0 153 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 Q9UFV3 132 aa4.04□□□□□ -1.76
NPM1-207ENST00000521260 NCOA6Q14686 2063 aaPredicted RBP4.04□□□□□ -1.76
NPM1-207ENST00000521260 PTPRSQ13332 1948 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 TRBV19A0A075B6N1 114 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 IGKV1-6A0A0C4DH72 117 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 IGKV1-12A0A0C4DH73 117 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 TRBV7-6A0A0J9YX20 115 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 RBMY1BA6NDE4 496 aaKnown RBP4.03□□□□□ -1.76
NPM1-207ENST00000521260 RBMY1EA6NEQ0 496 aaKnown RBP4.03□□□□□ -1.76
NPM1-207ENST00000521260 C17orf100A8MU93 164 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 TEX22C9J3V5 150 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 INS-IGF2F8WCM5 200 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 PPP1R17O96001 155 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 IGKV1D-12P01611 117 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 IGHV3-33P01772 117 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 RBMY1DP0C7P1 496 aaKnown RBP4.03□□□□□ -1.76
NPM1-207ENST00000521260 RBMY1A1P0DJD3 496 aaKnown RBP4.03□□□□□ -1.76
NPM1-207ENST00000521260 RBMY1CP0DJD4 496 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 VPREB1P12018 145 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 DEFA4P12838 97 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 GP9P14770 177 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 RBMY1FQ15415 496 aaKnown RBP4.03□□□□□ -1.76
NPM1-207ENST00000521260 C2orf83Q53S99 150 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 DGAT2L7PQ6IED9 249 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 Q6JHZ5 121 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 DEFB132Q7Z7B7 95 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 TDHQ8IZJ6 230 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 LYPD1Q8N2G4 141 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 MAPKAPK5-AS1Q8N8E1 139 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 SLC25A29Q8N8R3 303 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 TMEM75Q8N9X5 138 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 NEXN-AS1Q8NBZ9 246 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 SRSF12Q8WXF0 261 aaKnown RBP4.03□□□□□ -1.76
NPM1-207ENST00000521260 DSCR8Q96T75 97 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 VKORC1Q9BQB6 163 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 KLK5Q9Y337 293 aaPredicted RBP4.03□□□□□ -1.76
NPM1-207ENST00000521260 Q9Y3F1 56 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 EML5Q05BV3 1969 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 KIAA1549Q9HCM3 1950 aa4.03□□□□□ -1.76
NPM1-207ENST00000521260 TDRD6O60522 2096 aaKnown RBP4.02□□□□□ -1.77
NPM1-207ENST00000521260 RALGAPA1Q6GYQ0 2036 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 TRAV3A0A0B4J244 114 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.02□□□□□ -1.77
NPM1-207ENST00000521260 TMEM30CPA0ZSE6 113 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 PLAC8L1A1L4L8 177 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 NDUFB3O43676 98 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 ARMS2P0C7Q2 107 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 GATA1P15976 413 aaPredicted RBP4.02□□□□□ -1.77
NPM1-207ENST00000521260 LGALS3P17931 250 aaKnown RBP4.02□□□□□ -1.77
NPM1-207ENST00000521260 CD70P32970 193 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 MYCNOSP40205 109 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 MRPL51Q4U2R6 128 aaKnown RBP4.02□□□□□ -1.77
NPM1-207ENST00000521260 FAM27BQ5VT28 67 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 Q6ZRU5 148 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 LINC00305Q7Z4B0 112 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 MED12LQ86YW9 2145 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 FAM110DQ8TAY7 271 aaPredicted RBP4.02□□□□□ -1.77
NPM1-207ENST00000521260 C10orf105Q8TEF2 133 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 UPK3BQ9BT76 320 aa4.02□□□□□ -1.77
NPM1-207ENST00000521260 MRPL35Q9NZE8 188 aaKnown RBP4.02□□□□□ -1.77
NPM1-207ENST00000521260 RPUSD1Q9UJJ7 312 aaKnown RBP4.02□□□□□ -1.77
NPM1-207ENST00000521260 PHF3Q92576 2039 aaKnown RBP4.01□□□□□ -1.77
NPM1-207ENST00000521260 IGKV1-27A0A075B6S5 117 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 C5orf63A6NC05 138 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 SDHAF1A6NFY7 115 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 NDUFA3O95167 84 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 IGLV2-14P01704 120 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 IGHV3-30P01768 117 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 IGHV3-30-5P0DP03 117 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 ERHP84090 104 aaKnown RBP4.01□□□□□ -1.77
NPM1-207ENST00000521260 CFHR3Q02985 330 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 TCF15Q12870 199 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 Q86TA4 180 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 VKORC1L1Q8N0U8 176 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 LINC00482Q8N8I6 264 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 WFDC5Q8TCV5 224 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 GPHA2Q96T91 129 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 SLC25A15Q9Y619 301 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 BPTFQ12830 3046 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 ADAMTS9Q9P2N4 1935 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 ATG2BQ96BY7 2078 aa4.01□□□□□ -1.77
NPM1-207ENST00000521260 SCN10AQ9Y5Y9 1956 aa4□□□□□ -1.77
NPM1-207ENST00000521260 TRBV7-1A0A0A6YYK4 115 aa4□□□□□ -1.77
NPM1-207ENST00000521260 IGKV1D-43A0A0B4J1Z2 117 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms