RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 KRTAP10-5P60370 271 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 HIST1H1AQ02539 215 aaPredicted RBP1.91□□□□□ -2.1
SREK1-208ENST00000520580 ZNF345Q14585 488 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 IGFBP7Q16270 282 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 OR8B3Q8NGG8 313 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 AP1S3Q96PC3 154 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 HS3ST2Q9Y278 367 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 NCOR1O75376 2440 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 IGLV3-9A0A075B6K5 115 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 LOC107984640A0A0U1RRK4 108 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 C19orf84I3L1E1 186 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 DBIP07108 87 aaKnown RBP1.91□□□□□ -2.1
SREK1-208ENST00000520580 COX6A1P12074 109 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 ESRGQ1W209 222 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 Q8IYB0 196 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 TCTE3Q8IZS6 198 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 OR5D16Q8NGK9 328 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 RETNLBQ9BQ08 111 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 TCEAL2Q9H3H9 227 aaPredicted RBP1.91□□□□□ -2.1
SREK1-208ENST00000520580 CBLN4Q9NTU7 201 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 SBF1O95248 1867 aa1.91□□□□□ -2.1
SREK1-208ENST00000520580 CDC42BPAQ5VT25 1732 aa1.9□□□□□ -2.1
SREK1-208ENST00000520580 RIC1Q4ADV7 1423 aa1.9□□□□□ -2.1
SREK1-208ENST00000520580 CCNB3Q8WWL7 1395 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 UBR2Q8IWV8 1755 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 TEP1Q99973 2627 aaKnown RBP1.9□□□□□ -2.11
SREK1-208ENST00000520580 BORCS7-ASMTA0A0B4J1R7 106 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 C7orf71A4D174 169 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 SDCBPO00560 298 aaPredicted RBP1.9□□□□□ -2.11
SREK1-208ENST00000520580 PSG9Q00887 426 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 KLRD1Q13241 179 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 TMEM244Q5VVB8 128 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 PHF5AQ7RTV0 110 aaKnown RBP1.9□□□□□ -2.11
SREK1-208ENST00000520580 LINC00471Q8N535 108 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 CCDC18Q5T9S5 1454 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 MBD5Q9P267 1494 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 NAIPQ13075 1403 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 NCKAP5O14513 1909 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 ANAPC1Q9H1A4 1944 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 IGKV1D-17A0A075B6S4 117 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 IGHV1-58A0A0C4DH39 117 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 H3BMG7 143 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 DPM2O94777 84 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 OR2H2O95918 312 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 PRB2P02812 416 aaPredicted RBP1.9□□□□□ -2.11
SREK1-208ENST00000520580 SRP9P49458 86 aaKnown RBP1.9□□□□□ -2.11
SREK1-208ENST00000520580 Q5XG85 94 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 PATE2Q6UY27 113 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 Q6ZTI0 123 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 OR51A4Q8NGJ6 313 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 OR5H6Q8NGV6 325 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 CHCHD1Q96BP2 118 aaKnown RBP1.9□□□□□ -2.11
SREK1-208ENST00000520580 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 LXNQ9BS40 222 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 CALML5Q9NZT1 146 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 U3KQ87 197 aa1.9□□□□□ -2.11
SREK1-208ENST00000520580 NCOR2Q9Y618 2525 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 ZSWIM8A7E2V4 1837 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 ASH1LQ9NR48 2969 aaKnown RBP1.89□□□□□ -2.11
SREK1-208ENST00000520580 CCDC141Q6ZP82 1450 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 KDM6AO15550 1401 aaPredicted RBP1.89□□□□□ -2.11
SREK1-208ENST00000520580 CASKIN1Q8WXD9 1431 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 ACACBO00763 2458 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 TRAV13-1A0A0B4J241 112 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 TIMM21Q9BVV7 248 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 SPANXCQ9NY87 97 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 POLEQ07864 2286 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 PTPN13Q12923 2485 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 ZFC3H1O60293 1989 aaKnown RBP1.89□□□□□ -2.11
SREK1-208ENST00000520580 QSER1Q2KHR3 1735 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 GCN1Q92616 2671 aaKnown RBP1.89□□□□□ -2.11
SREK1-208ENST00000520580 HTTP42858 3142 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 DCHS1Q96JQ0 3298 aa1.89□□□□□ -2.11
SREK1-208ENST00000520580 EIF2AK4Q9P2K8 1649 aaKnown RBP1.89□□□□□ -2.11
SREK1-208ENST00000520580 TRAV5A0A0B4J249 113 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 ZNF705FA8MVS1 300 aaPredicted RBP1.88□□□□□ -2.11
SREK1-208ENST00000520580 IBA57-AS1B1ANH7 110 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 B4DSR2 109 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 PAEPP09466 180 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 DEFB128Q7Z7B8 93 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 C9orf163Q8N9P6 203 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 TAS2R4Q9NYW5 299 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 PRO2289Q9P1D8 64 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 BTAF1O14981 1849 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 NUP98P52948 1817 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 A8MWV9 139 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 C1QCP02747 245 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 IFNA4P05014 189 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 ASAH2BP0C7U1 165 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 MPC1LP0DKB6 136 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 ZNF462Q96JM2 2506 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 ITSN1Q15811 1721 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 FER1L6Q2WGJ9 1857 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 GCC2Q8IWJ2 1684 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 CCDC171Q6TFL3 1326 aa1.88□□□□□ -2.11
SREK1-208ENST00000520580 CDH23Q9H251 3354 aa1.87□□□□□ -2.11
SREK1-208ENST00000520580 M0R2Z0 102 aa1.87□□□□□ -2.11
SREK1-208ENST00000520580 ZNF737O75373 536 aa1.87□□□□□ -2.11
SREK1-208ENST00000520580 SCTP09683 121 aa1.87□□□□□ -2.11
SREK1-208ENST00000520580 P0C880 135 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms