RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 GLIPR1L1Q6UWM5 242 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 CASC2Q6XLA1 102 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 Q86TA4 180 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 SKA2Q8WVK7 121 aaPredicted RBP0.53□□□□□ -2.32
SKP1-207ENST00000520417 TAF9BQ9HBM6 251 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 MED31Q9Y3C7 131 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 RTL9Q8NET4 1388 aa0.53□□□□□ -2.32
SKP1-207ENST00000520417 CECR2Q9BXF3 1484 aa0.53□□□□□ -2.33
SKP1-207ENST00000520417 NINQ8N4C6 2090 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 GNG14A0A1W2PPG7 69 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 NUPR2A6NF83 97 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 ARL5CA6NH57 179 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 SULT1C4O75897 302 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 SLC25A4P12235 298 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 GTF2A1P52655 376 aaPredicted RBP0.52□□□□□ -2.33
SKP1-207ENST00000520417 MAXP61244 160 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 SNRPD3P62318 126 aaKnown RBP0.52□□□□□ -2.33
SKP1-207ENST00000520417 BLCAPP62952 87 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 LINC00269Q8N2A0 174 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 BRK1Q8WUW1 75 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 CLEC2BQ92478 149 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 CCDC115Q96NT0 180 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 AP1S3Q96PC3 154 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 CIB3Q96Q77 187 aaPredicted RBP0.52□□□□□ -2.33
SKP1-207ENST00000520417 NABP2Q9BQ15 211 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 HSPB11Q9Y547 144 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 APCP25054 2843 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 TECPR2O15040 1411 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 CD109Q6YHK3 1445 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 CAMSAP2Q08AD1 1489 aa0.52□□□□□ -2.33
SKP1-207ENST00000520417 N4BP2Q86UW6 1770 aaPredicted RBP0.52□□□□□ -2.33
SKP1-207ENST00000520417 TRBV30A0A0K0K1B3 111 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 LOC107986453A0A1B0GWG9 222 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 CITO14578 2027 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 SYNMO15061 1565 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 SAA1P0DJI8 122 aaPredicted RBP0.51□□□□□ -2.33
SKP1-207ENST00000520417 CRYGSP22914 178 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 SRP9P49458 86 aaKnown RBP0.51□□□□□ -2.33
SKP1-207ENST00000520417 POLR2HP52434 150 aaKnown RBP0.51□□□□□ -2.33
SKP1-207ENST00000520417 RFX7Q2KHR2 1363 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 LINC00299Q6ZSB3 139 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 ZCCHC23Q6ZST2 131 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 SMIM7Q9BQ49 75 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 LIMD2Q9BT23 127 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 DDA1Q9BW61 102 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 CBLN4Q9NTU7 201 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 SMPXQ9UHP9 88 aa0.51□□□□□ -2.33
SKP1-207ENST00000520417 ZGRF1Q86YA3 2104 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 MCM3APO60318 1980 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 BCL9O00512 1426 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 TRAPPC8Q9Y2L5 1435 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 A0A0J9YY99 117 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 A0A1W2PPB8 328 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 A0A1W2PRS3 328 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 TMEM189A5PLL7 270 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 KIR3DP1A8MWS1 328 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 HBDP02042 147 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 KDELR1P24390 212 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 CMPK1P30085 196 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 CKS2P33552 79 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 RPL22P35268 128 aaKnown RBP0.5□□□□□ -2.33
SKP1-207ENST00000520417 ETV6P41212 452 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 DNAJB13P59910 316 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 QRFPP83859 136 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 DR1Q01658 176 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 LINC00575Q6W349 94 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 Q6ZQY7 126 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 TCTEX1D1Q8N7M0 179 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 MORN4Q8NDC4 146 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 CCL4L1Q8NHW4 92 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 CALML5Q9NZT1 146 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 GINS2Q9Y248 185 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 NDUFAF1Q9Y375 327 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 MPC1Q9Y5U8 109 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 ALPK3Q96L96 1907 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 NUP210LQ5VU65 1888 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 PLXNA4Q9HCM2 1894 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 LAMA4Q16363 1823 aa0.5□□□□□ -2.33
SKP1-207ENST00000520417 IGHV1-24A0A0C4DH33 117 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 LOC107984640A0A0U1RRK4 108 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 EDF1O60869 148 aaKnown RBP0.49□□□□□ -2.33
SKP1-207ENST00000520417 PDE6GP18545 87 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 RPS3P23396 243 aaKnown RBP eCLIP0.49□□□□□ -2.332e-11■■□□□ 12.7
SKP1-207ENST00000520417 B2MP61769 119 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 RPS28P62857 69 aaKnown RBP0.49□□□□□ -2.33
SKP1-207ENST00000520417 PSPHP78330 225 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 IQCJQ1A5X6 159 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 SPINK9Q5DT21 86 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 TOMM20LQ6UXN7 152 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 OR51A4Q8NGJ6 313 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 MRPL36Q9P0J6 103 aaKnown RBP0.49□□□□□ -2.33
SKP1-207ENST00000520417 COMMD3Q9UBI1 195 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 SIP14410 1827 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 UBR2Q8IWV8 1755 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 CNTRLQ7Z7A1 2325 aa0.49□□□□□ -2.33
SKP1-207ENST00000520417 FANCMQ8IYD8 2048 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 ZDBF2Q9HCK1 2354 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 KIAA1107Q9UPP5 1409 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 DSPPQ9NZW4 1301 aa0.48□□□□□ -2.33
SKP1-207ENST00000520417 TRBV7-6A0A0J9YX20 115 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms