RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 RER1O15258 196 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 KLF7O75840 302 aaPredicted RBP2.04□□□□□ -2.08
VPS13B-207ENST00000518569 MPC2O95563 127 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 C1QAP02745 245 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF286BP0CG31 522 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 IL7P13232 177 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 HLA-DRB4P13762 266 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 RPL27AP46776 148 aaKnown RBP2.04□□□□□ -2.08
VPS13B-207ENST00000518569 DAPP51397 102 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 INSL3P51460 131 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 FOXA3P55318 350 aaPredicted RBP2.04□□□□□ -2.08
VPS13B-207ENST00000518569 FGF12P61328 243 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 LY6EQ16553 131 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 LINC00303Q3SY05 128 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 EDC4Q6P2E9 1401 aaKnown RBP2.04□□□□□ -2.08
VPS13B-207ENST00000518569 CEMP1Q6PRD7 247 aaPredicted RBP2.04□□□□□ -2.08
VPS13B-207ENST00000518569 PP632Q6XCG6 107 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 PHF5AQ7RTV0 110 aaKnown RBP2.04□□□□□ -2.08
VPS13B-207ENST00000518569 AAED1Q7RTV5 226 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 C10orf111Q8N326 155 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 RPP25LQ8N5L8 163 aaKnown RBP2.04□□□□□ -2.08
VPS13B-207ENST00000518569 C3orf22Q8N5N4 141 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 RNF182Q8N6D2 247 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 OR8D4Q8NGM9 314 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 OR5AK2Q8NH90 309 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 CARD19Q96LW7 228 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF714Q96N38 554 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 VPS13AQ96RL7 3174 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 SDF2Q99470 211 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 FAM60AQ9NP50 221 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 IL36BQ9NZH7 164 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF835Q9Y2P0 537 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 HLA-DRB4X5D2U9 266 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 CHD9Q3L8U1 2897 aa2.04□□□□□ -2.08
VPS13B-207ENST00000518569 VWA8A3KMH1 1905 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 CDK5RAP2Q96SN8 1893 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 LRRC37AA6NMS7 1700 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 CFAP47Q6ZTR5 3102 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 FRYLO94915 3013 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 CHD7Q9P2D1 2997 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 RIC1Q4ADV7 1423 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 ANKRD11Q6UB99 2663 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-207ENST00000518569 IGLV2-18A0A075B6J9 118 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-207ENST00000518569 PIGBOS1A0A0B4J2F0 54 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 FAM236AA0A1B0GUQ0 79 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 FAM236BA0A1B0GV22 79 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 SPAARA0A1B0GVQ0 90 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF860A6NHJ4 632 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 COLCA2A8K830 154 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 TMEM256-PLSCR3K7ERE1 68 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 M0R378 163 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 IGLV2-8P01709 118 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 CTSDP07339 412 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-207ENST00000518569 SEC11BP0C7V7 166 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 SLC25A4P12235 298 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 FABP4P15090 132 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 DYNLT3P51808 116 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 ARPP19P56211 112 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 RPL30P62888 115 aaKnown RBP2.03□□□□□ -2.08
VPS13B-207ENST00000518569 MRPS36P82909 103 aaKnown RBP2.03□□□□□ -2.08
VPS13B-207ENST00000518569 PEA15Q15121 130 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 FAM78AQ5JUQ0 283 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 C9orf153Q5TBE3 101 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 LAIR2Q6ISS4 152 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 HMGN2P46Q86SG4 172 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 TEN1Q86WV5 123 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 BPIFA4PQ86YQ2 179 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 GPHB5Q86YW7 130 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF101Q8IZC7 436 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF645Q8N7E2 425 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 MORN4Q8NDC4 146 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 OR4X2Q8NGF9 303 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 OR5C1Q8NGR4 320 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 RBMXL1Q96E39 390 aaKnown RBP2.03□□□□□ -2.08
VPS13B-207ENST00000518569 HIST1H2BLQ99880 126 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 ATG5Q9H1Y0 275 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 PRO1933Q9H354 126 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 PRO3102Q9H379 93 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 ZNF286AQ9HBT8 521 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 C21orf62Q9NYP8 219 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 KLK5Q9Y337 293 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-207ENST00000518569 TPRKBQ9Y3C4 175 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 CHCHD2Q9Y6H1 151 aaPredicted RBP2.03□□□□□ -2.08
VPS13B-207ENST00000518569 PTPRFP10586 1907 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 MYH3P11055 1940 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 MYH13Q9UKX3 1938 aa2.03□□□□□ -2.08
VPS13B-207ENST00000518569 BRWD1Q9NSI6 2320 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 COL1A2P08123 1366 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 KMT2BQ9UMN6 2715 aaPredicted RBP2.02□□□□□ -2.09
VPS13B-207ENST00000518569 MYH10P35580 1976 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 DLG5Q8TDM6 1919 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 TRBV20-1A0A075B6N2 111 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 IGHV7-4-1A0A0J9YVY3 117 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 FAM24AA6NFZ4 105 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF727A8MUV8 499 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 CCDC179H3BU77 68 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 PGLYRP1O75594 196 aaPredicted RBP2.02□□□□□ -2.09
VPS13B-207ENST00000518569 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
VPS13B-207ENST00000518569 TRACP01848 142 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms