RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SPINK8P0C7L1 97 aa5.28□□□□□ -1.56
CPNE3-203ENST00000517490 C4orf48Q5BLP8 95 aa5.28□□□□□ -1.56
CPNE3-203ENST00000517490 ZMAT4Q9H898 229 aa5.28□□□□□ -1.56
CPNE3-203ENST00000517490 V9GYY9 64 aa5.28□□□□□ -1.56
CPNE3-203ENST00000517490 TRAV21A0A0B4J279 112 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 E7EUB6 86 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 ZNF415Q09FC8 603 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 C12orf74Q32Q52 190 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 C17orf77Q96MU5 243 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 ZFAND3Q9H8U3 227 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 TRBV25-1A0A075B6N4 114 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 MRPL35Q9NZE8 188 aaKnown RBP5.27□□□□□ -1.57
CPNE3-203ENST00000517490 YLPM1P49750 1951 aaKnown RBP5.27□□□□□ -1.57
CPNE3-203ENST00000517490 MYMXA0A1B0GTQ4 84 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 SFTA2Q6UW10 78 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 KAAG1Q9UBP8 84 aa5.27□□□□□ -1.57
CPNE3-203ENST00000517490 IGLL5B9A064 214 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 USP17L23D6RBM5 183 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 H3BMG7 143 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 ZFAND6Q6FIF0 208 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 CLEC19AQ6UXS0 136 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 FOXI2Q6ZQN5 318 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 IGHV3-49A0A0A0MS15 119 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 TRAV8-2A0A0B4J237 113 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 OOSP1A8MZH6 123 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 I3L2K1 104 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 RRN3P1Q2M238 152 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 UTF1Q5T230 341 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 IGKV3-7A0A075B6H7 116 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 A0A087WX48 190 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 IGKV1-17P01599 117 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 EGR2P11161 476 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-203ENST00000517490 FXYD2P54710 66 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 SUMO2P61956 95 aaKnown RBP5.26□□□□□ -1.57
CPNE3-203ENST00000517490 IGFL4Q6B9Z1 124 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 FAM159AQ6UWV7 190 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 DTX2Q86UW9 622 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 DPH3P1Q9H4G8 78 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 ZNF256Q9Y2P7 627 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-203ENST00000517490 SRSF6Q13247 344 aaKnown RBP5.26□□□□□ -1.57
CPNE3-203ENST00000517490 SPAG8Q99932 426 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-203ENST00000517490 SIRPDQ9H106 197 aa5.26□□□□□ -1.57
CPNE3-203ENST00000517490 A0A1W2PRX2 142 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 F8VRH5 84 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 ERCC8Q13216 396 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 MSMPQ1L6U9 139 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 C2orf91Q6ZV80 131 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 OR11H6Q8NGC7 330 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 PPDPFLQ8WWR9 84 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 JMJD8Q96S16 334 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 DKK4Q9UBT3 224 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 TRBV20-1A0A075B6N2 111 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 H3BS24 57 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 PRSS2P07478 247 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 SEC61GP60059 68 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 URB1-AS1Q96HZ7 61 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 LYNX1G3V0Z9 82 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 OVOL1O14753 267 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 LYNX1P0DP58 116 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 HLA-DRB4P13762 266 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 C15orf32Q32M92 178 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 HLA-DRB4X5D2U9 266 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 PCNTO95613 3336 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 C7orf69Q9H7B7 122 aa5.25□□□□□ -1.57
CPNE3-203ENST00000517490 M0R1W7 72 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 GAGE2BQ13066 116 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 GAGE2EQ4V326 116 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 RITA1Q96K30 269 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 GAGE2DQ9UEU5 116 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 CEP350Q5VT06 3117 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 CACNA1GO43497 2377 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 RNASE4P34096 147 aaKnown RBP5.24□□□□□ -1.57
CPNE3-203ENST00000517490 LOXL1Q08397 574 aaPredicted RBP5.24□□□□□ -1.57
CPNE3-203ENST00000517490 AMTNQ6UX39 209 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 C9orf139Q6ZV77 190 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 ERG28Q9UKR5 140 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 INTS1Q8N201 2190 aaKnown RBP5.24□□□□□ -1.57
CPNE3-203ENST00000517490 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.24□□□□□ -1.57
CPNE3-203ENST00000517490 VWC2LB2RUY7 222 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 K7EIM0 57 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 COL8A2P25067 703 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 ZNF56Q15929 161 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 MINOS1Q5TGZ0 78 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 Q6ZS92 163 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 IL17RELQ6ZVW7 336 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 LINC00477Q96M19 166 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 MINOS1-NBL1R4GNA1 71 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 A0A0G2JNJ9 132 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 TEX22C9J3V5 150 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 FAM106AQ4KMX7 169 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 IGFL2Q6UWQ7 119 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 LINC01560Q8TB33 94 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 SMIM2Q9BVW6 85 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 Q9UFV3 132 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 FAM215AQ9Y5M1 114 aa5.24□□□□□ -1.57
CPNE3-203ENST00000517490 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-203ENST00000517490 TRGV3P03979 118 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 WFDC2Q14508 124 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 ZNF672Q499Z4 452 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-203ENST00000517490 FAM74A4Q5TZK3 123 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms