RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 RBPMSQ93062 196 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RAB37Q96AX2 223 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MRPS24Q96EL2 167 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MRPL57Q9BQC6 102 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GINS4Q9BRT9 223 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SLC35B3Q9H1N7 401 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NAA60Q9H7X0 242 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LINC00574Q9H8X3 128 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMEM106BQ9NUM4 274 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TAS2R8Q9NYW2 309 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 METTL1Q9UBP6 276 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR5V1Q9UGF6 321 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SCP2D1Q9UJQ7 156 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FAM215AQ9Y5M1 114 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ICOSQ9Y6W8 199 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 V9GYS6 101 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HLA-DRB4X5D2U9 266 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RGS12O14924 1447 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CEP162Q5TB80 1403 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 BAZ1AQ9NRL2 1556 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CHD1O14646 1710 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ABCA3Q99758 1704 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRPM3Q9HCF6 1732 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DOCK1Q14185 1865 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PXDNLA1KZ92 1463 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GAPVD1Q14C86 1478 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RPRD2Q5VT52 1461 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TEX14Q8IWB6 1497 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MAGI1Q96QZ7 1491 aaPredicted RBP0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 STRCQ7RTU9 1775 aa0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DIDO1Q9BTC0 2240 aaKnown RBP0.6□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TOPAZ1Q8N9V7 1692 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ARHGAP5Q13017 1502 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MAP3K1Q13233 1512 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ANKRD36BQ8N2N9 1353 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MYO5AQ9Y4I1 1855 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 COL24A1Q17RW2 1714 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RTEL1-TNFRSF6BF6WH68 1400 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CRB1P82279 1406 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KIAA0100Q14667 2235 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGKV1D-37A0A075B6S9 117 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRAV7A0A075B6U4 112 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRGV5A0A0B4J1U4 118 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRBV10-2A0A0K0K1G8 114 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 A0A1B0GU33 70 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FAM236AA0A1B0GUQ0 79 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LOC100130705A0A1B0GUX0 176 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FAM236BA0A1B0GV22 79 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LOC107986453A0A1B0GWG9 222 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TCRBV3S1A0A5B6 114 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C19orf71A6NCJ1 209 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 A6NED7 52 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C17orf98A8MV24 154 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C17orf112F2Z3M2 114 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 APOC4-APOC2K7ER74 178 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 M0R2P5 195 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LYRM1O43325 122 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PSCAO43653 123 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SYNGR2O43760 224 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HYPMO75409 117 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SNAPC5O75971 98 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 APOC2P02655 101 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MT-ND6P03923 174 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRGV3P03979 118 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SLC25A5P05141 298 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF705BP0CI00 300 aaPredicted RBP0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TPT1P13693 172 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FABP4P15090 132 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ETV6P41212 452 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RPL28P46779 137 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SNRPD3P62318 126 aaKnown RBP0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DYNLT1P63172 113 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 Q56UQ5 140 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KHDC3LQ587J8 217 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C12orf73Q69YU5 71 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 Q6AWC8 147 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DPPA3Q6W0C5 159 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 Q6ZUT4 128 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C2orf91Q6ZV80 131 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GKN2Q86XP6 184 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 BPIFA4PQ86YQ2 179 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR5AS1Q8N127 324 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 Q8N2B8 174 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C9orf62Q8N4C0 152 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LINC00471Q8N535 108 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KCNRGQ8N5I3 272 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TTC9CQ8N5M4 171 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LINC00311Q8N616 119 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TEX29Q8N6K0 151 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FAM216BQ8N7L0 139 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PLPP5Q8NEB5 264 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CCL4L1Q8NHW4 92 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LCN9Q8WX39 176 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LINC00526Q96FQ7 95 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DPH3Q96FX2 82 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZNF714Q96N38 554 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 AQP10Q96PS8 301 aa0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CIB3Q96Q77 187 aaPredicted RBP0.59□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IMMP2LQ96T52 175 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms