RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 ZC2HC1AQ96GY0 325 aa6.9□□□□□ -1.3
CPNE4-213ENST00000515418 GPR61Q9BZJ8 451 aa6.9□□□□□ -1.3
CPNE4-213ENST00000515418 AGPAT4-IT1Q9H0P7 198 aa6.9□□□□□ -1.3
CPNE4-213ENST00000515418 MS4A6AQ9H2W1 248 aa6.9□□□□□ -1.3
CPNE4-213ENST00000515418 A0A1W2PPQ1 181 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 ADARB2-AS1A8MUL3 147 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 ZNF705GA8MUZ8 300 aaPredicted RBP6.89□□□□□ -1.31
CPNE4-213ENST00000515418 F6UB75 175 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 PPP1R2P9O14990 202 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 MEOX2P50222 304 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 CRIP1P50238 77 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 TCL1AP56279 114 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 ZNF738Q8NE65 137 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 OSTCQ9NRP0 149 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 ZFP30Q9Y2G7 519 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 SPINK4O60575 86 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 CSN3P07498 182 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 RPS10P46783 165 aaKnown RBP6.89□□□□□ -1.31
CPNE4-213ENST00000515418 DCANP1Q8TF63 244 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 PRR25Q96S07 402 aa6.89□□□□□ -1.31
CPNE4-213ENST00000515418 TRRAPQ9Y4A5 3859 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 TRBV6-1A0A0K0K1D8 114 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 GATCO43716 136 aaKnown RBP6.88□□□□□ -1.31
CPNE4-213ENST00000515418 FRMD6-AS1P0C7T7 363 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 S100PP25815 95 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 FHL3Q13643 280 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 ARL6IP6Q8N6S5 226 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-213ENST00000515418 WFDC12Q8WWY7 111 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 FAM210BQ96KR6 192 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 FBN1P35555 2871 aaKnown RBP6.88□□□□□ -1.31
CPNE4-213ENST00000515418 SERTM2A0A1B0GWG4 89 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 C19orf71A6NCJ1 209 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 ZNF688P0C7X2 276 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 ZNF80P51504 273 aaPredicted RBP6.88□□□□□ -1.31
CPNE4-213ENST00000515418 FOXL1Q12952 345 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 ZFP82Q8N141 532 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 DAZAP1Q96EP5 407 aaKnown RBP6.88□□□□□ -1.31
CPNE4-213ENST00000515418 IL36BQ9NZH7 164 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 PEMTQ9UBM1 199 aa6.88□□□□□ -1.31
CPNE4-213ENST00000515418 TRBV24-1A0A075B6N3 115 aa6.87□□□□□ -1.31
CPNE4-213ENST00000515418 GZMBP10144 247 aa6.87□□□□□ -1.31
CPNE4-213ENST00000515418 CD33P20138 364 aa6.87□□□□□ -1.31
CPNE4-213ENST00000515418 BMI1P35226 326 aa6.87□□□□□ -1.31
CPNE4-213ENST00000515418 RPL19P84098 196 aaKnown RBP6.87□□□□□ -1.31
CPNE4-213ENST00000515418 Q6ZQT7 251 aa6.87□□□□□ -1.31
CPNE4-213ENST00000515418 FAM231DQ6ZW35 169 aa6.87□□□□□ -1.31
CPNE4-213ENST00000515418 SMIM12Q96EX1 92 aa6.87□□□□□ -1.31
CPNE4-213ENST00000515418 PYGO2Q9BRQ0 406 aa6.87□□□□□ -1.31
CPNE4-213ENST00000515418 STAB1Q9NY15 2570 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 RBAKDNA6NC62 111 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 J3KRW8 73 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 K7EQG2 157 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 M0QZ24 198 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 P01737 135 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 DEFB114Q30KQ6 69 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 PSMG4Q5JS54 123 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 SAPCD1Q5SSQ6 148 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 GDF5OSQ5U4N7 250 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 KCNIP4Q6PIL6 250 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 C9orf47Q6ZRZ4 202 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 MRPL53Q96EL3 112 aaKnown RBP6.86□□□□□ -1.31
CPNE4-213ENST00000515418 IZUMO1RA6ND01 250 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 OVOL1O14753 267 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 CT45A10P0DMU9 189 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 ID1P41134 155 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 ZNF138P52744 262 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 HIST1H1AQ02539 215 aaPredicted RBP6.86□□□□□ -1.31
CPNE4-213ENST00000515418 CD300EQ496F6 205 aaPredicted RBP6.86□□□□□ -1.31
CPNE4-213ENST00000515418 RBPMS2Q6ZRY4 209 aaKnown RBP6.86□□□□□ -1.31
CPNE4-213ENST00000515418 OR10J6PQ8NGY7 276 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 IMMP2LQ96T52 175 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 RPP21Q9H633 154 aaKnown RBP6.86□□□□□ -1.31
CPNE4-213ENST00000515418 CLEC5AQ9NY25 188 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 ZNF492Q9P255 531 aa6.86□□□□□ -1.31
CPNE4-213ENST00000515418 TMSB15BA0A087X1C1 80 aa6.85□□□□□ -1.31
CPNE4-213ENST00000515418 SMIM27A0A1W2PRY6 76 aa6.85□□□□□ -1.31
CPNE4-213ENST00000515418 SH2D1AO60880 128 aa6.85□□□□□ -1.31
CPNE4-213ENST00000515418 TRGC2P03986 189 aa6.85□□□□□ -1.31
CPNE4-213ENST00000515418 OR8A1Q8NGG7 326 aa6.85□□□□□ -1.31
CPNE4-213ENST00000515418 OR2D3Q8NGH3 330 aa6.85□□□□□ -1.31
CPNE4-213ENST00000515418 DYNLRB2Q8TF09 96 aa6.85□□□□□ -1.31
CPNE4-213ENST00000515418 BIN3Q9NQY0 253 aa6.85□□□□□ -1.31
CPNE4-213ENST00000515418 IGKV3-20P01619 116 aa6.84□□□□□ -1.31
CPNE4-213ENST00000515418 KIR3DS1Q14943 382 aa6.84□□□□□ -1.31
CPNE4-213ENST00000515418 SMUG1Q53HV7 270 aa6.84□□□□□ -1.31
CPNE4-213ENST00000515418 PRR31Q5SQ13 230 aa6.84□□□□□ -1.31
CPNE4-213ENST00000515418 FAM162BQ5T6X4 162 aa6.84□□□□□ -1.31
CPNE4-213ENST00000515418 TSKUQ8WUA8 353 aa6.84□□□□□ -1.31
CPNE4-213ENST00000515418 GTSF1Q8WW33 167 aa6.84□□□□□ -1.31
CPNE4-213ENST00000515418 NEU1Q99519 415 aa6.84□□□□□ -1.31
CPNE4-213ENST00000515418 FBLL1A6NHQ2 334 aaKnown RBP6.84□□□□□ -1.32
CPNE4-213ENST00000515418 HIGD1CA8MV81 97 aa6.84□□□□□ -1.32
CPNE4-213ENST00000515418 NPIPB6E9PJ23 425 aa6.84□□□□□ -1.32
CPNE4-213ENST00000515418 SNRPD3P62318 126 aaKnown RBP6.84□□□□□ -1.32
CPNE4-213ENST00000515418 PAFAH1B2P68402 229 aa6.84□□□□□ -1.32
CPNE4-213ENST00000515418 ZNF124Q15973 351 aa6.84□□□□□ -1.32
CPNE4-213ENST00000515418 PRR9Q5T870 116 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms