RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 OCIAD2Q56VL3 154 aa0.72□□□□□ -2.29
HMGCS1-207ENST00000514610 CASC2Q6XLA1 102 aa0.72□□□□□ -2.29
HMGCS1-207ENST00000514610 TEX29Q8N6K0 151 aa0.72□□□□□ -2.29
HMGCS1-207ENST00000514610 CLEC2BQ92478 149 aa0.72□□□□□ -2.29
HMGCS1-207ENST00000514610 DIRC1Q969H9 104 aa0.72□□□□□ -2.29
HMGCS1-207ENST00000514610 ISOC1Q96CN7 298 aa0.72□□□□□ -2.29
HMGCS1-207ENST00000514610 MCEEQ96PE7 176 aa0.72□□□□□ -2.29
HMGCS1-207ENST00000514610 A0A1W2PRE2 83 aa0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 BCL2P10415 239 aa0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 RPL37AP61513 92 aaKnown RBP0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 HRCT1Q6UXD1 115 aa0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 Q86TA4 180 aa0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 OR5AK2Q8NH90 309 aa0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 CCL4L1Q8NHW4 92 aa0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 PRELID3AQ96N28 172 aa0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 CCDC32Q9BV29 185 aa0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 V9GYQ6 96 aa0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
HMGCS1-207ENST00000514610 APCP25054 2843 aa0.7□□□□□ -2.3
HMGCS1-207ENST00000514610 C3orf85A0A1B0GTC6 90 aa0.7□□□□□ -2.3
HMGCS1-207ENST00000514610 A0A1B0GV72 72 aa0.7□□□□□ -2.3
HMGCS1-207ENST00000514610 MRPS36P82909 103 aaKnown RBP0.7□□□□□ -2.3
HMGCS1-207ENST00000514610 LINC00299Q6ZSB3 139 aa0.7□□□□□ -2.3
HMGCS1-207ENST00000514610 RMND5BQ96G75 393 aaPredicted RBP0.7□□□□□ -2.3
HMGCS1-207ENST00000514610 ATPIF1Q9UII2 106 aa0.7□□□□□ -2.3
HMGCS1-207ENST00000514610 LAMTOR2Q9Y2Q5 125 aa0.7□□□□□ -2.3
HMGCS1-207ENST00000514610 LOC285556D6RIA3 1793 aa0.7□□□□□ -2.3
HMGCS1-207ENST00000514610 NAV3Q8IVL0 2385 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 PFDN1O60925 122 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 IGHV3-33P01772 117 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 FXYD4P59646 89 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 MAXP61244 160 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 GRPEL2Q8TAA5 225 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 LPAR5Q9H1C0 372 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 FKBP11Q9NYL4 201 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 TRAPPC2LQ9UL33 140 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 BOKQ9UMX3 212 aaPredicted RBP0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
HMGCS1-207ENST00000514610 TRBV30A0A0K0K1B3 111 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 ZNF727A8MUV8 499 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 E7EQ34 232 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 TRACP01848 142 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 NDUFA6P56556 154 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 FAM135BQ49AJ0 1406 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 Q6ZQY7 126 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 LINC00305Q7Z4B0 112 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 THEM6Q8WUY1 208 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 USP24Q9UPU5 2620 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 MED31Q9Y3C7 131 aa0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 AFDNP55196 1824 aaKnown RBP0.68□□□□□ -2.3
HMGCS1-207ENST00000514610 AHNAKQ09666 5890 aaKnown RBP0.67□□□□□ -2.3
HMGCS1-207ENST00000514610 TPT1P13693 172 aaKnown RBP0.67□□□□□ -2.3
HMGCS1-207ENST00000514610 SPINT3P49223 89 aa0.67□□□□□ -2.3
HMGCS1-207ENST00000514610 SMPXQ9UHP9 88 aa0.67□□□□□ -2.3
HMGCS1-207ENST00000514610 LOC107984156A0A0G2JMH3 177 aa0.66□□□□□ -2.3
HMGCS1-207ENST00000514610 K7EIL1 84 aa0.66□□□□□ -2.3
HMGCS1-207ENST00000514610 RPL7P18124 248 aaKnown RBP0.66□□□□□ -2.3
HMGCS1-207ENST00000514610 PDE6GP18545 87 aa0.66□□□□□ -2.3
HMGCS1-207ENST00000514610 POLR2HP52434 150 aaKnown RBP0.66□□□□□ -2.3
HMGCS1-207ENST00000514610 FOXA3P55318 350 aaPredicted RBP0.66□□□□□ -2.3
HMGCS1-207ENST00000514610 ARL17AQ8IVW1 177 aa0.66□□□□□ -2.3
HMGCS1-207ENST00000514610 FGD6Q6ZV73 1430 aa0.65□□□□□ -2.3
HMGCS1-207ENST00000514610 TRAV13-1A0A0B4J241 112 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 A0A0J9YY99 117 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 TRBV27A0A0K0K1C4 114 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 PGRMC1O00264 195 aaKnown RBP0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 FAM107AO95990 144 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 IFNA21P01568 189 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 SPATA8Q6RVD6 105 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 AP1S3Q96PC3 154 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 CIB3Q96Q77 187 aaPredicted RBP0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 CCL19Q99731 98 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 SELENOSQ9BQE4 189 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 LXNQ9BS40 222 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 HELZP42694 1942 aaKnown RBP0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 KDM5CP41229 1560 aa0.65□□□□□ -2.31
HMGCS1-207ENST00000514610 A0A0D9SG42 100 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 LOC107984640A0A0U1RRK4 108 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 M0QZK8 103 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 SAA1P0DJI8 122 aaPredicted RBP0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 SPINK9Q5DT21 86 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 SAMD13Q5VXD3 122 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 C5orf17Q8NAS9 161 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 MORN4Q8NDC4 146 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 OR51A4Q8NGJ6 313 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 BRK1Q8WUW1 75 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 NABP2Q9BQ15 211 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 NAV2Q8IVL1 2488 aa0.64□□□□□ -2.31
HMGCS1-207ENST00000514610 TRBV7-6A0A0J9YX20 115 aa0.63□□□□□ -2.31
HMGCS1-207ENST00000514610 LOC107986453A0A1B0GWG9 222 aa0.63□□□□□ -2.31
HMGCS1-207ENST00000514610 CRYGSP22914 178 aa0.63□□□□□ -2.31
HMGCS1-207ENST00000514610 C6orf52Q5T4I8 152 aa0.63□□□□□ -2.31
HMGCS1-207ENST00000514610 SMIM15Q7Z3B0 74 aa0.63□□□□□ -2.31
HMGCS1-207ENST00000514610 CENPHQ9H3R5 247 aa0.63□□□□□ -2.31
HMGCS1-207ENST00000514610 CBLN4Q9NTU7 201 aa0.63□□□□□ -2.31
HMGCS1-207ENST00000514610 FRAS1Q86XX4 4008 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 ESPL1Q14674 2120 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 A2MP01023 1474 aa0.62□□□□□ -2.31
HMGCS1-207ENST00000514610 ARL5CA6NH57 179 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms