RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SPINK9Q5DT21 86 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 SAMD13Q5VXD3 122 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 Q86TA4 180 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 PRR15Q8IV56 129 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 OR5H6Q8NGV6 325 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 RMND5BQ96G75 393 aaPredicted RBP0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 LIMD2Q9BT23 127 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 DDA1Q9BW61 102 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 LRTM1Q9HBL6 345 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 NIT2Q9NQR4 276 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 TRAPPC2LQ9UL33 140 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 ZGRF1Q86YA3 2104 aa0.56□□□□□ -2.32
TRAPPC11-207ENST00000511409 FRMPD1Q5SYB0 1578 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 TRAV13-1A0A0B4J241 112 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 ARL5CA6NH57 179 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 GABARAPH6UMI1 98 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 TRACP01848 142 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 SRP9P49458 86 aaKnown RBP0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 RPS28P62857 69 aaKnown RBP0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 NEDD8Q15843 81 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 TOMM20LQ6UXN7 152 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 LINC00299Q6ZSB3 139 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 THEM6Q8WUY1 208 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 ANP32BQ92688 251 aaKnown RBP0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 PRELID3AQ96N28 172 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 BATF3Q9NR55 127 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 SPANXCQ9NY87 97 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 SMPXQ9UHP9 88 aa0.55□□□□□ -2.32
TRAPPC11-207ENST00000511409 SYNMO15061 1565 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 LOC107984156A0A0G2JMH3 177 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 TRDV1A0A1B0GX56 115 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 IGHV3-33P01772 117 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 SPINT3P49223 89 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 CASC2Q6XLA1 102 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 Q6ZQY7 126 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 ZCCHC23Q6ZST2 131 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 AKAP14Q86UN6 197 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 TAC4Q86UU9 113 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 ARL17AQ8IVW1 177 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 C5orf17Q8NAS9 161 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 TMEM229BQ8NBD8 167 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 OR5AK2Q8NH90 309 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 PYDC1Q8WXC3 89 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 DIRC1Q969H9 104 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 CCDC115Q96NT0 180 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 C10orf95Q9H7T3 257 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 GINS2Q9Y248 185 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 NDUFAF1Q9Y375 327 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 MED31Q9Y3C7 131 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 TECPR2O15040 1411 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 PTPRDP23468 1912 aa0.54□□□□□ -2.32
TRAPPC11-207ENST00000511409 ADGBQ8N7X0 1667 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 TRBV27A0A0K0K1C4 114 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 C3orf85A0A1B0GTC6 90 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 BBIP1A8MTZ0 92 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 H7BYZ3 331 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 SAA1P0DJI8 122 aaPredicted RBP0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 RPL7P18124 248 aaKnown RBP0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 KDELR1P24390 212 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 CMPK1P30085 196 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 POLR2HP52434 150 aaKnown RBP0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 FOXA3P55318 350 aaPredicted RBP0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 RPL37AP61513 92 aaKnown RBP0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 BLCAPP62952 87 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 HRCT1Q6UXD1 115 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 LINC00269Q8N2A0 174 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 TEX29Q8N6K0 151 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 AIF1LQ9BQI0 150 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 TAF9BQ9HBM6 251 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 CALML5Q9NZT1 146 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 BCL9O00512 1426 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 KIAA1107Q9UPP5 1409 aa0.53□□□□□ -2.32
TRAPPC11-207ENST00000511409 BORCS7-ASMTA0A0B4J1R7 106 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 LOC107986453A0A1B0GWG9 222 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 PRORSD1PA6NEY8 169 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 K7EIL1 84 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 M0QZK8 103 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 DEGS1O15121 323 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 SMIM24O75264 130 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 SULT1C4O75897 302 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 DBIP07108 87 aaKnown RBP0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 PAEPP09466 180 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 NBEAP1P0C6P0 100 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 SLC25A4P12235 298 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 CRYGSP22914 178 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 RPL22P35268 128 aaKnown RBP0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 ETV6P41212 452 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 GTF2A1P52655 376 aaPredicted RBP0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 DNAJB13P59910 316 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 MAXP61244 160 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 C3orf62Q6ZUJ4 267 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 AP1S3Q96PC3 154 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 CIB3Q96Q77 187 aaPredicted RBP0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 NABP2Q9BQ15 211 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 SMIM7Q9BQ49 75 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 C19orf12Q9NSK7 152 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 CBLN4Q9NTU7 201 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 FKBP11Q9NYL4 201 aa0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 ZNF469Q96JG9 3925 aaPredicted RBP0.52□□□□□ -2.33
TRAPPC11-207ENST00000511409 TRAPPC8Q9Y2L5 1435 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms