RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
COL6A6-203ENST00000511332 NKX6-2Q9C056 277 aaPredicted RBP9.34□□□□□ -0.91
COL6A6-203ENST00000511332 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
COL6A6-203ENST00000511332 ARL2-SNX15V9GYD0 113 aa9.34□□□□□ -0.91
COL6A6-203ENST00000511332 A0A0J9YWU9 116 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 SMIM9A6NGZ8 99 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 GGTLC3B5MD39 225 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 K7EQM0 130 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 CRXO43186 299 aaPredicted RBP9.33□□□□□ -0.92
COL6A6-203ENST00000511332 H2AFB1P0C5Y9 115 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 CT45A10P0DMU9 189 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 NKX2-5P52952 324 aaPredicted RBP9.33□□□□□ -0.92
COL6A6-203ENST00000511332 ERCC8Q13216 396 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 TMEM256Q8N2U0 113 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 Q8NAQ8 132 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 SFT2D1Q8WV19 159 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 MBD3L1Q8WWY6 194 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 NEU1Q99519 415 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 C20orf144Q9BQM9 153 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 PLA2G2EQ9NZK7 142 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 X6R8D5 127 aa9.33□□□□□ -0.92
COL6A6-203ENST00000511332 HUWE1Q7Z6Z7 4374 aaKnown RBP9.32□□□□□ -0.92
COL6A6-203ENST00000511332 TRAV12-2A0A075B6T6 113 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 TRBV7-9A0A0J9YWB2 115 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 TEX46H3BTG2 121 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 SULT1A2P50226 295 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 PPT1P50897 306 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 ZNF138P52744 262 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 GOLT1AQ6ZVE7 132 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 IL17DQ8TAD2 202 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 VGLL1Q99990 258 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 AGPAT4-IT1Q9H0P7 198 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 TMPRSS5Q9H3S3 457 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 ZNF492Q9P255 531 aa9.32□□□□□ -0.92
COL6A6-203ENST00000511332 IGHV4-28A0A0C4DH34 117 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 FAM74A7A6NL05 159 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 HBE1P02100 147 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 NMBP08949 121 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 CRISP2P16562 243 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 UBE2G2P60604 165 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 SUMO1P63165 101 aaKnown RBP9.31□□□□□ -0.92
COL6A6-203ENST00000511332 GNG5P63218 68 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 GFI1BQ5VTD9 330 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 C1orf158Q8N1D5 194 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 FAM19A4Q96LR4 140 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 TCEAL7Q9BRU2 100 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 ATG101Q9BSB4 218 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 YTHDF2Q9Y5A9 579 aaKnown RBP9.31□□□□□ -0.92
COL6A6-203ENST00000511332 LENEPQ9Y5L5 61 aa9.31□□□□□ -0.92
COL6A6-203ENST00000511332 TMEM189A5PLL7 270 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 KLLNB2CW77 178 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 IFNA7P01567 189 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 TCRAP04437 139 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 RRN3P1Q2M238 152 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 CYB561D1Q8N8Q1 229 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 Q8TAT8 98 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 MUC7Q8TAX7 377 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 NIPSNAP3BQ9BS92 247 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 EPDR1Q9UM22 224 aa9.3□□□□□ -0.92
COL6A6-203ENST00000511332 TRAV1-1A0A0B4J248 108 aa9.29□□□□□ -0.92
COL6A6-203ENST00000511332 A0A1B0GV50 99 aa9.29□□□□□ -0.92
COL6A6-203ENST00000511332 C7orf71A4D174 169 aa9.29□□□□□ -0.92
COL6A6-203ENST00000511332 FBLL1A6NHQ2 334 aaKnown RBP9.29□□□□□ -0.92
COL6A6-203ENST00000511332 H7BYZ3 331 aa9.29□□□□□ -0.92
COL6A6-203ENST00000511332 J3KRW8 73 aa9.29□□□□□ -0.92
COL6A6-203ENST00000511332 GPX1P07203 203 aa9.29□□□□□ -0.92
COL6A6-203ENST00000511332 TMEM75Q8N9X5 138 aa9.29□□□□□ -0.92
COL6A6-203ENST00000511332 NDFIP1Q9BT67 221 aa9.29□□□□□ -0.92
COL6A6-203ENST00000511332 MANBALQ9NQG1 85 aa9.29□□□□□ -0.92
COL6A6-203ENST00000511332 TRAV12-3A0A0B4J271 114 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 TEX48A0A1B0GUV7 120 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 DEFB4AO15263 64 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 RBMY1A1P0DJD3 496 aaKnown RBP9.28□□□□□ -0.92
COL6A6-203ENST00000511332 RBMY1CP0DJD4 496 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 TAS2R60P59551 318 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 RBMY1FQ15415 496 aaKnown RBP9.28□□□□□ -0.92
COL6A6-203ENST00000511332 CST9LP1Q5W188 147 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 ALKAL2Q6UX46 152 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 ZFAND2AQ8N6M9 145 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 HIST1H2BAQ96A08 127 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 LINC01587Q99440 93 aa9.28□□□□□ -0.92
COL6A6-203ENST00000511332 TRAV8-1A0A0A6YYK1 113 aa9.27□□□□□ -0.93
COL6A6-203ENST00000511332 F6UZH7 168 aa9.27□□□□□ -0.93
COL6A6-203ENST00000511332 C3orf84H3BNL1 204 aa9.27□□□□□ -0.93
COL6A6-203ENST00000511332 PEX7O00628 323 aa9.27□□□□□ -0.93
COL6A6-203ENST00000511332 PAGE4O60829 102 aa9.27□□□□□ -0.93
COL6A6-203ENST00000511332 BTN1A1Q13410 526 aa9.27□□□□□ -0.93
COL6A6-203ENST00000511332 KIR3DS1Q14943 382 aa9.27□□□□□ -0.93
COL6A6-203ENST00000511332 PYGO2Q9BRQ0 406 aa9.27□□□□□ -0.93
COL6A6-203ENST00000511332 IFNA1P01562 189 aa9.26□□□□□ -0.93
COL6A6-203ENST00000511332 RNASE4P34096 147 aaKnown RBP9.26□□□□□ -0.93
COL6A6-203ENST00000511332 FLI1Q01543 452 aaPredicted RBP9.26□□□□□ -0.93
COL6A6-203ENST00000511332 C11orf45Q8TAV5 145 aa9.26□□□□□ -0.93
COL6A6-203ENST00000511332 TMEM263Q8WUH6 116 aaKnown RBP9.26□□□□□ -0.93
COL6A6-203ENST00000511332 C16orf74Q96GX8 76 aa9.26□□□□□ -0.93
COL6A6-203ENST00000511332 GNG13Q9P2W3 67 aa9.26□□□□□ -0.93
COL6A6-203ENST00000511332 DNAH7Q8WXX0 4024 aa9.26□□□□□ -0.93
COL6A6-203ENST00000511332 ZNF705GA8MUZ8 300 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms