RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 IGHV1-24A0A0C4DH33 117 aa12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 LINC00614P0C842 121 aa12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 ZNF25P17030 456 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 S100A7P31151 101 aa12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 FCGR2BP31994 310 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 PSG9Q00887 426 aa12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 DEFB112Q30KQ8 113 aa12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 Q56UQ5 140 aa12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 C9orf139Q6ZV77 190 aa12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 COX8CQ7Z4L0 72 aa12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 C17orf77Q96MU5 243 aa12.48□□□□□ -0.41
SQSTM1-213ENST00000510187 DLEU1O43261 78 aa12.47□□□□□ -0.41
SQSTM1-213ENST00000510187 ZNF124Q15973 351 aa12.47□□□□□ -0.41
SQSTM1-213ENST00000510187 C21orf62Q9NYP8 219 aa12.47□□□□□ -0.41
SQSTM1-213ENST00000510187 LAMTOR2Q9Y2Q5 125 aa12.47□□□□□ -0.41
SQSTM1-213ENST00000510187 NCBP2LA6PVI3 153 aaKnown RBP12.46□□□□□ -0.41
SQSTM1-213ENST00000510187 F8W735 103 aaPredicted RBP12.46□□□□□ -0.41
SQSTM1-213ENST00000510187 CT45A10P0DMU9 189 aa12.46□□□□□ -0.41
SQSTM1-213ENST00000510187 CSN1S1P47710 185 aa12.46□□□□□ -0.41
SQSTM1-213ENST00000510187 PIFOQ8TCI5 191 aa12.46□□□□□ -0.41
SQSTM1-213ENST00000510187 TMEM208Q9BTX3 173 aa12.46□□□□□ -0.41
SQSTM1-213ENST00000510187 TMUB1Q9BVT8 246 aa12.46□□□□□ -0.41
SQSTM1-213ENST00000510187 ZFHX3Q15911 3703 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 SYS1-DBNDD2H3BUS1 97 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 H3BUX3 64 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 LEPROTL1O95214 131 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 LY6G6DO95868 133 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 RPL7P18124 248 aaKnown RBP12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 G0S2P27469 103 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 TSPOP30536 169 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 BATFQ16520 125 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 ATOH7Q8N100 152 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 CLEC5AQ9NY25 188 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 NDPQ00604 133 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 ST20Q9HBF5 79 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 HSPB8Q9UJY1 196 aa12.45□□□□□ -0.42
SQSTM1-213ENST00000510187 ARMS2P0C7Q2 107 aa12.44□□□□□ -0.42
SQSTM1-213ENST00000510187 FOSL1P15407 271 aa12.44□□□□□ -0.42
SQSTM1-213ENST00000510187 CRIP1P50238 77 aa12.44□□□□□ -0.42
SQSTM1-213ENST00000510187 PET117Q6UWS5 81 aa12.44□□□□□ -0.42
SQSTM1-213ENST00000510187 ZNF493Q6ZR52 646 aa12.44□□□□□ -0.42
SQSTM1-213ENST00000510187 TMEM219Q86XT9 240 aa12.44□□□□□ -0.42
SQSTM1-213ENST00000510187 OR4C46A6NHA9 309 aa12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 IGLL1P15814 213 aa12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 LY6EQ16553 131 aa12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 KLK9Q2XQG4 91 aa12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 SAPCD1Q5SSQ6 148 aa12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 Q71RC1 249 aaPredicted RBP12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 TMEM160Q9NX00 188 aa12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 KLK9Q9UKQ9 250 aa12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 SONP18583 2426 aaKnown RBP12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 SETXQ7Z333 2677 aaKnown RBP12.43□□□□□ -0.42
SQSTM1-213ENST00000510187 CYSRT1A8MQ03 144 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 M0QZ24 198 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 M0R3E3 92 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 MAJINQ3KP22 176 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 SPATA12Q7Z6I5 190 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 MAP1LC3CQ9BXW4 147 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 NDUFB8O95169 186 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 IGHV4-59P01825 116 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 RPS20P60866 119 aaKnown RBP12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 Q6YL49 198 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 Q8N9W7 124 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 RABAC1Q9UI14 185 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 GOLT1BQ9Y3E0 138 aa12.42□□□□□ -0.42
SQSTM1-213ENST00000510187 A6NDX4 124 aa12.41□□□□□ -0.42
SQSTM1-213ENST00000510187 MOB4Q9Y3A3 225 aa12.41□□□□□ -0.42
SQSTM1-213ENST00000510187 IGHV7-81A0A0B4J1V7 117 aa12.4□□□□□ -0.42
SQSTM1-213ENST00000510187 TMEM189A5PLL7 270 aa12.4□□□□□ -0.42
SQSTM1-213ENST00000510187 SRSF2Q01130 221 aaKnown RBP12.4□□□□□ -0.42
SQSTM1-213ENST00000510187 FAM110DQ8TAY7 271 aaPredicted RBP12.4□□□□□ -0.42
SQSTM1-213ENST00000510187 C8orf49Q96NF6 230 aa12.4□□□□□ -0.42
SQSTM1-213ENST00000510187 AP5S1Q9NUS5 200 aa12.4□□□□□ -0.42
SQSTM1-213ENST00000510187 S4R3C0 116 aa12.4□□□□□ -0.42
SQSTM1-213ENST00000510187 SH2D1AO60880 128 aa12.4□□□□□ -0.43
SQSTM1-213ENST00000510187 CTSGP08311 255 aa12.4□□□□□ -0.43
SQSTM1-213ENST00000510187 EGR2P11161 476 aaPredicted RBP12.4□□□□□ -0.43
SQSTM1-213ENST00000510187 RAB9AP51151 201 aa12.4□□□□□ -0.43
SQSTM1-213ENST00000510187 PRR31Q5SQ13 230 aa12.4□□□□□ -0.43
SQSTM1-213ENST00000510187 STPG4Q8N801 248 aa12.4□□□□□ -0.43
SQSTM1-213ENST00000510187 U3KQK5 164 aa12.4□□□□□ -0.43
SQSTM1-213ENST00000510187 HSBP1L1C9JCN9 74 aa12.39□□□□□ -0.43
SQSTM1-213ENST00000510187 HOXA3O43365 443 aaPredicted RBP12.39□□□□□ -0.43
SQSTM1-213ENST00000510187 LINC00173Q6ZV60 143 aa12.39□□□□□ -0.43
SQSTM1-213ENST00000510187 C5orf56Q8N8D9 126 aa12.39□□□□□ -0.43
SQSTM1-213ENST00000510187 MS4A6AQ9H2W1 248 aa12.39□□□□□ -0.43
SQSTM1-213ENST00000510187 HIVEP2P31629 2446 aa12.39□□□□□ -0.43
SQSTM1-213ENST00000510187 OR2T8A6NH00 312 aa12.38□□□□□ -0.43
SQSTM1-213ENST00000510187 BMI1P35226 326 aa12.38□□□□□ -0.43
SQSTM1-213ENST00000510187 SCGB2A2Q13296 93 aa12.38□□□□□ -0.43
SQSTM1-213ENST00000510187 FA2HQ7L5A8 372 aa12.38□□□□□ -0.43
SQSTM1-213ENST00000510187 PRR25Q96S07 402 aa12.38□□□□□ -0.43
SQSTM1-213ENST00000510187 A0A087X0K7 114 aa12.37□□□□□ -0.43
SQSTM1-213ENST00000510187 SRD5A1P18405 259 aa12.37□□□□□ -0.43
SQSTM1-213ENST00000510187 TFPI2P48307 235 aa12.37□□□□□ -0.43
SQSTM1-213ENST00000510187 RELQ04864 619 aaPredicted RBP12.37□□□□□ -0.43
SQSTM1-213ENST00000510187 LINC01545Q5VT33 79 aa12.37□□□□□ -0.43
SQSTM1-213ENST00000510187 LYZL1Q6UWQ5 148 aa12.37□□□□□ -0.43
SQSTM1-213ENST00000510187 OR10AG1Q8NH19 301 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms