RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 CD300CQ08708 224 aa12.55□□□□□ -0.4
TPM3-220ENST00000509601 ICAM4Q14773 271 aa12.55□□□□□ -0.4
TPM3-220ENST00000509601 C9orf47Q6ZRZ4 202 aa12.55□□□□□ -0.4
TPM3-220ENST00000509601 FXYD5Q96DB9 178 aa12.55□□□□□ -0.4
TPM3-220ENST00000509601 ZNF503Q96F45 646 aa12.55□□□□□ -0.4
TPM3-220ENST00000509601 FUT9Q9Y231 359 aa12.55□□□□□ -0.4
TPM3-220ENST00000509601 HSPB11Q9Y547 144 aa12.55□□□□□ -0.4
TPM3-220ENST00000509601 RNF141Q8WVD5 230 aa12.54□□□□□ -0.4
TPM3-220ENST00000509601 ATP5SQ99766 215 aa12.54□□□□□ -0.4
TPM3-220ENST00000509601 VGLL1Q99990 258 aa12.54□□□□□ -0.4
TPM3-220ENST00000509601 PYGO2Q9BRQ0 406 aa12.54□□□□□ -0.4
TPM3-220ENST00000509601 PAXXQ9BUH6 204 aa12.54□□□□□ -0.4
TPM3-220ENST00000509601 MRPL32Q9BYC8 188 aaKnown RBP12.54□□□□□ -0.4
TPM3-220ENST00000509601 WFDC1Q9HC57 220 aa12.54□□□□□ -0.4
TPM3-220ENST00000509601 BATF3Q9NR55 127 aa12.54□□□□□ -0.4
TPM3-220ENST00000509601 C7orf71A4D174 169 aa12.53□□□□□ -0.4
TPM3-220ENST00000509601 C17orf112F2Z3M2 114 aa12.53□□□□□ -0.4
TPM3-220ENST00000509601 NUDT3O95989 172 aa12.53□□□□□ -0.4
TPM3-220ENST00000509601 CRISP2P16562 243 aa12.53□□□□□ -0.4
TPM3-220ENST00000509601 RPL12P30050 165 aaKnown RBP12.53□□□□□ -0.4
TPM3-220ENST00000509601 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
TPM3-220ENST00000509601 IGKV2-40A0A087WW87 121 aaPredicted RBP12.52□□□□□ -0.41
TPM3-220ENST00000509601 PRSS29PA6NIE9 313 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 IGKV2D-40P01614 121 aaPredicted RBP12.52□□□□□ -0.41
TPM3-220ENST00000509601 OR10J4P0C629 311 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 FAM3BP58499 235 aaPredicted RBP12.52□□□□□ -0.41
TPM3-220ENST00000509601 DAZ2Q13117 558 aaKnown RBP12.52□□□□□ -0.41
TPM3-220ENST00000509601 BTN1A1Q13410 526 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 FAM122CQ6P4D5 195 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 Q6ZQT7 251 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 LINC00467Q9BRT7 94 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 SMIM3Q9BZL3 60 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 KCNIP2Q9NS61 270 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 ZNF492Q9P255 531 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 MBD2Q9UBB5 411 aa12.52□□□□□ -0.41
TPM3-220ENST00000509601 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 SNURFLB1AK76 121 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 GAGE7O76087 117 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 NMBP08949 121 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 HOXA5P20719 270 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
TPM3-220ENST00000509601 OR5I1Q13606 314 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 FFAR4Q5NUL3 377 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 PRR9Q5T870 116 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 ZFAND2AQ8N6M9 145 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 C11orf72Q8NBR9 251 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 PHYHIPLQ96FC7 376 aa12.51□□□□□ -0.41
TPM3-220ENST00000509601 Q6ZTI0 123 aa12.5□□□□□ -0.41
TPM3-220ENST00000509601 ZNRF2Q8NHG8 242 aa12.5□□□□□ -0.41
TPM3-220ENST00000509601 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
TPM3-220ENST00000509601 GSN-AS1Q9NRJ2 163 aa12.5□□□□□ -0.41
TPM3-220ENST00000509601 LINC00588Q9Y4M8 146 aa12.5□□□□□ -0.41
TPM3-220ENST00000509601 RYR1P21817 5038 aa12.5□□□□□ -0.41
TPM3-220ENST00000509601 TRAV26-1A0A087WT03 109 aa12.49□□□□□ -0.41
TPM3-220ENST00000509601 EIF3GO75821 320 aaKnown RBP eCLIP12.49□□□□□ -0.41
TPM3-220ENST00000509601 IFNA5P01569 189 aa12.49□□□□□ -0.41
TPM3-220ENST00000509601 GPX1P07203 203 aa12.49□□□□□ -0.41
TPM3-220ENST00000509601 PET100P0DJ07 73 aa12.49□□□□□ -0.41
TPM3-220ENST00000509601 RANP62826 216 aaKnown RBP12.49□□□□□ -0.41
TPM3-220ENST00000509601 ANXA2RQ3ZCQ2 193 aa12.49□□□□□ -0.41
TPM3-220ENST00000509601 TMEM78Q5T7P6 136 aa12.49□□□□□ -0.41
TPM3-220ENST00000509601 SCGB1C1Q8TD33 95 aa12.49□□□□□ -0.41
TPM3-220ENST00000509601 ALG5Q9Y673 324 aa12.49□□□□□ -0.41
TPM3-220ENST00000509601 LRP1BQ9NZR2 4599 aa12.49□□□□□ -0.41
TPM3-220ENST00000509601 OR7C2O60412 319 aa12.48□□□□□ -0.41
TPM3-220ENST00000509601 LYPD1Q8N2G4 141 aa12.48□□□□□ -0.41
TPM3-220ENST00000509601 EIF4E3Q8N5X7 224 aaKnown RBP12.48□□□□□ -0.41
TPM3-220ENST00000509601 TP53TG3Q9ULZ0 132 aa12.48□□□□□ -0.41
TPM3-220ENST00000509601 ZNF138P52744 262 aa12.47□□□□□ -0.41
TPM3-220ENST00000509601 CCL18P55774 89 aa12.47□□□□□ -0.41
TPM3-220ENST00000509601 RXFP4Q8TDU9 374 aa12.47□□□□□ -0.41
TPM3-220ENST00000509601 GNPNAT1Q96EK6 184 aaPredicted RBP12.47□□□□□ -0.41
TPM3-220ENST00000509601 Q9H3A6 140 aa12.47□□□□□ -0.41
TPM3-220ENST00000509601 KLF12Q9Y4X4 402 aa12.47□□□□□ -0.41
TPM3-220ENST00000509601 TRBV7-9A0A0J9YWB2 115 aa12.46□□□□□ -0.41
TPM3-220ENST00000509601 A0A0J9YY99 117 aa12.46□□□□□ -0.41
TPM3-220ENST00000509601 M6PRP20645 277 aa12.46□□□□□ -0.41
TPM3-220ENST00000509601 C1orf134Q5TEV5 83 aa12.46□□□□□ -0.41
TPM3-220ENST00000509601 ZNF680Q8NEM1 530 aa12.46□□□□□ -0.41
TPM3-220ENST00000509601 C18orf15Q96N68 181 aa12.46□□□□□ -0.41
TPM3-220ENST00000509601 TMPRSS5Q9H3S3 457 aa12.46□□□□□ -0.41
TPM3-220ENST00000509601 MUC4Q99102 2169 aa12.45□□□□□ -0.42
TPM3-220ENST00000509601 IGHV1OR15-1A0A075B7D0 117 aa12.45□□□□□ -0.42
TPM3-220ENST00000509601 NBDYA0A0U1RRE5 68 aa12.45□□□□□ -0.42
TPM3-220ENST00000509601 RBAKDNA6NC62 111 aa12.45□□□□□ -0.42
TPM3-220ENST00000509601 DIRC3C9JPN6 131 aa12.45□□□□□ -0.42
TPM3-220ENST00000509601 SPINK4O60575 86 aa12.45□□□□□ -0.42
TPM3-220ENST00000509601 UBE2L3P68036 154 aaKnown RBP12.45□□□□□ -0.42
TPM3-220ENST00000509601 SSX7Q7RTT5 188 aa12.45□□□□□ -0.42
TPM3-220ENST00000509601 Q8TAT8 98 aa12.45□□□□□ -0.42
TPM3-220ENST00000509601 VSIG2Q96IQ7 327 aa12.45□□□□□ -0.42
TPM3-220ENST00000509601 H3BNG1 76 aa12.44□□□□□ -0.42
TPM3-220ENST00000509601 CSN1S1P47710 185 aa12.44□□□□□ -0.42
TPM3-220ENST00000509601 TCL1AP56279 114 aa12.44□□□□□ -0.42
TPM3-220ENST00000509601 TAS2R45P59539 299 aa12.44□□□□□ -0.42
TPM3-220ENST00000509601 ESRGQ1W209 222 aa12.44□□□□□ -0.42
TPM3-220ENST00000509601 KHDC3LQ587J8 217 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms