RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 NPCDR1Q9BY65 106 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 Q9H8V8 135 aa8.69□□□□□ -1.02
PDPN-208ENST00000509009 A0A0J9YY99 117 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 C7orf71A4D174 169 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 KLLNB2CW77 178 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 CD300CQ08708 224 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 ESRGQ1W209 222 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 Q6ZTI0 123 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 ZNF575Q86XF7 245 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 EXOC3-AS1Q8N2X6 119 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 C6orf223Q8N319 242 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 OR5C1Q8NGR4 320 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 BLNKQ8WV28 456 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 LINC00467Q9BRT7 94 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 SLC25A2Q9BXI2 301 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 GSN-AS1Q9NRJ2 163 aa8.68□□□□□ -1.02
PDPN-208ENST00000509009 E5RGE8 158 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 H0YIZ8 118 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 H3BNG1 76 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 NBEAP1P0C6P0 100 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 RNASE4P34096 147 aaKnown RBP8.67□□□□□ -1.02
PDPN-208ENST00000509009 ICAM4Q14773 271 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 C9orf47Q6ZRZ4 202 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 MIR17HGQ75NE6 70 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 C11orf72Q8NBR9 251 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 THAP6Q8TBB0 222 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 NMES1Q9C002 83 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 SLC25A31Q9H0C2 315 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 OR5AC2Q9NZP5 309 aa8.67□□□□□ -1.02
PDPN-208ENST00000509009 PCLOQ9Y6V0 5065 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 NMBP08949 121 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 CRISP2P16562 243 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 IFITM3Q01628 133 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 BTN1A1Q13410 526 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 ANXA2RQ3ZCQ2 193 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 EIF4E3Q8N5X7 224 aaKnown RBP8.66□□□□□ -1.02
PDPN-208ENST00000509009 ENKURQ8TC29 256 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 VSIG2Q96IQ7 327 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 VGLL1Q99990 258 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 OR51M1Q9H341 326 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 TMPRSS5Q9H3S3 457 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 AAMDCQ9H7C9 122 aa8.66□□□□□ -1.02
PDPN-208ENST00000509009 IGKV2-40A0A087WW87 121 aaPredicted RBP8.65□□□□□ -1.02
PDPN-208ENST00000509009 UPK1BO75841 260 aa8.65□□□□□ -1.02
PDPN-208ENST00000509009 IGKV2D-40P01614 121 aaPredicted RBP8.65□□□□□ -1.02
PDPN-208ENST00000509009 GPX1P07203 203 aa8.65□□□□□ -1.02
PDPN-208ENST00000509009 CYCSP99999 105 aaKnown RBP8.65□□□□□ -1.02
PDPN-208ENST00000509009 FAM122CQ6P4D5 195 aa8.65□□□□□ -1.02
PDPN-208ENST00000509009 ZFAND2AQ8N6M9 145 aa8.65□□□□□ -1.02
PDPN-208ENST00000509009 ZNF680Q8NEM1 530 aa8.65□□□□□ -1.02
PDPN-208ENST00000509009 FXYD5Q96DB9 178 aa8.65□□□□□ -1.02
PDPN-208ENST00000509009 C18orf15Q96N68 181 aa8.65□□□□□ -1.02
PDPN-208ENST00000509009 WDR61Q9GZS3 305 aaKnown RBP8.65□□□□□ -1.02
PDPN-208ENST00000509009 KLF12Q9Y4X4 402 aa8.65□□□□□ -1.02
PDPN-208ENST00000509009 RYR1P21817 5038 aa8.65□□□□□ -1.02
PDPN-208ENST00000509009 TRGV2A0A075B6R0 118 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 TRGV1A0A0A0MS02 117 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 INMT-MINDY4F8WBC2 141 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 LRRC37A5PQ49AS3 106 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 TMEM78Q5T7P6 136 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 Q6ZQT7 251 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 PAXXQ9BUH6 204 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 KRTAP1-5Q9BYS1 174 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 TP53TG3Q9ULZ0 132 aa8.64□□□□□ -1.03
PDPN-208ENST00000509009 A0A096LPF7 62 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 SPINK4O60575 86 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 PRAF2O60831 178 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 OR10J4P0C629 311 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 TCL1AP56279 114 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 H2BFSP57053 126 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 PRR9Q5T870 116 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 MARVELD1Q9BSK0 173 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 MRPL32Q9BYC8 188 aaKnown RBP8.63□□□□□ -1.03
PDPN-208ENST00000509009 PTTG2Q9NZH5 202 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 FUT9Q9Y231 359 aa8.63□□□□□ -1.03
PDPN-208ENST00000509009 MRPS16Q9Y3D3 137 aaKnown RBP8.63□□□□□ -1.03
PDPN-208ENST00000509009 IGHV1OR15-1A0A075B7D0 117 aa8.62□□□□□ -1.03
PDPN-208ENST00000509009 C16orf90A8MZG2 172 aa8.62□□□□□ -1.03
PDPN-208ENST00000509009 ZNF138P52744 262 aa8.62□□□□□ -1.03
PDPN-208ENST00000509009 RANP62826 216 aaKnown RBP8.62□□□□□ -1.03
PDPN-208ENST00000509009 IBA57Q5T440 356 aaKnown RBP8.62□□□□□ -1.03
PDPN-208ENST00000509009 PPP1R1CQ8WVI7 109 aa8.62□□□□□ -1.03
PDPN-208ENST00000509009 PHYHIPLQ96FC7 376 aa8.62□□□□□ -1.03
PDPN-208ENST00000509009 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
PDPN-208ENST00000509009 Q9H3A6 140 aa8.62□□□□□ -1.03
PDPN-208ENST00000509009 KCNIP2Q9NS61 270 aa8.62□□□□□ -1.03
PDPN-208ENST00000509009 TRBV7-9A0A0J9YWB2 115 aa8.61□□□□□ -1.03
PDPN-208ENST00000509009 A0A1W2PPQ1 181 aa8.61□□□□□ -1.03
PDPN-208ENST00000509009 C17orf112F2Z3M2 114 aa8.61□□□□□ -1.03
PDPN-208ENST00000509009 RGS13O14921 159 aa8.61□□□□□ -1.03
PDPN-208ENST00000509009 TTC32Q5I0X7 151 aa8.61□□□□□ -1.03
PDPN-208ENST00000509009 LYPD1Q8N2G4 141 aa8.61□□□□□ -1.03
PDPN-208ENST00000509009 ATP5SQ99766 215 aa8.61□□□□□ -1.03
PDPN-208ENST00000509009 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
PDPN-208ENST00000509009 OR7C2O60412 319 aa8.6□□□□□ -1.03
PDPN-208ENST00000509009 MPC2O95563 127 aa8.6□□□□□ -1.03
PDPN-208ENST00000509009 CSN1S1P47710 185 aa8.6□□□□□ -1.03
PDPN-208ENST00000509009 Q8TAT8 98 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms