RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 HSPB8Q9UJY1 196 aa8.45□□□□□ -1.06
LIN54-207ENST00000508171 CENPVL3A0A0U1RRI6 287 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 SMKR1H3BMG3 65 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 NCR2O95944 276 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 TWIST1Q15672 202 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 MRPL51Q4U2R6 128 aaKnown RBP8.44□□□□□ -1.06
LIN54-207ENST00000508171 SIGLEC8Q9NYZ4 499 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 LINC00527Q9UJ94 153 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 A0A096LNJ9 63 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 SCGB2A1O75556 95 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 ORM1P02763 201 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 GAGE1Q13065 139 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 PET117Q6UWS5 81 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 ITLN2Q8WWU7 325 aaPredicted RBP8.44□□□□□ -1.06
LIN54-207ENST00000508171 PRELID3AQ96N28 172 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 ST20Q9HBF5 79 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 SPG11Q96JI7 2443 aa8.44□□□□□ -1.06
LIN54-207ENST00000508171 NPFFO15130 113 aa8.43□□□□□ -1.06
LIN54-207ENST00000508171 FER1L6-AS1Q8NA97 138 aa8.43□□□□□ -1.06
LIN54-207ENST00000508171 U3KQK5 164 aa8.43□□□□□ -1.06
LIN54-207ENST00000508171 PPIFP30405 207 aaKnown RBP8.43□□□□□ -1.06
LIN54-207ENST00000508171 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.43□□□□□ -1.06
LIN54-207ENST00000508171 ORMDL3Q8N138 153 aa8.43□□□□□ -1.06
LIN54-207ENST00000508171 ARL6IP6Q8N6S5 226 aa8.43□□□□□ -1.06
LIN54-207ENST00000508171 OR10AG1Q8NH19 301 aa8.43□□□□□ -1.06
LIN54-207ENST00000508171 GOSR1O95249 250 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 IGLC6P0CF74 106 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 BMI1P35226 326 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 LINC01545Q5VT33 79 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 DMRTA1Q5VZB9 504 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 IL17RELQ6ZVW7 336 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 PSMG3-AS1Q96PY0 264 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 CSMD2Q7Z408 3487 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 UTP20O75691 2785 aaKnown RBP8.42□□□□□ -1.06
LIN54-207ENST00000508171 GAS8-AS1O95177 125 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 GNLYP22749 145 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 MPV17L2Q567V2 206 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 C5orf56Q8N8D9 126 aa8.42□□□□□ -1.06
LIN54-207ENST00000508171 CFAP46Q8IYW2 2715 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 FABP5P3A8MUU1 101 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 NPYP01303 97 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 CKS2P33552 79 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 BRD3OSQ6XYD6 125 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 OR8A1Q8NGG7 326 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 HSBP1L1C9JCN9 74 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 FOXE3Q13461 319 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 KLK9Q2XQG4 91 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 SCRT2Q9NQ03 307 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 KLK9Q9UKQ9 250 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 FLNCQ14315 2725 aa8.41□□□□□ -1.06
LIN54-207ENST00000508171 IGHV4-39P01824 125 aa8.4□□□□□ -1.06
LIN54-207ENST00000508171 SLC25A34Q6PIV7 304 aa8.4□□□□□ -1.06
LIN54-207ENST00000508171 Q6ZQT7 251 aa8.4□□□□□ -1.06
LIN54-207ENST00000508171 AGPAT4-IT1Q9H0P7 198 aa8.4□□□□□ -1.06
LIN54-207ENST00000508171 A0A087X0K7 114 aa8.4□□□□□ -1.07
LIN54-207ENST00000508171 TRAV8-2A0A0B4J237 113 aa8.4□□□□□ -1.07
LIN54-207ENST00000508171 FBLL1A6NHQ2 334 aaKnown RBP8.4□□□□□ -1.07
LIN54-207ENST00000508171 SNAI2O43623 268 aa8.4□□□□□ -1.07
LIN54-207ENST00000508171 NUDT3O95989 172 aa8.4□□□□□ -1.07
LIN54-207ENST00000508171 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.07
LIN54-207ENST00000508171 PRSS57Q6UWY2 283 aa8.4□□□□□ -1.07
LIN54-207ENST00000508171 EEF1AKMT3Q96AZ1 226 aa8.4□□□□□ -1.07
LIN54-207ENST00000508171 C11orf21Q9P2W6 132 aa8.4□□□□□ -1.07
LIN54-207ENST00000508171 ANKRD39Q53RE8 183 aa8.39□□□□□ -1.07
LIN54-207ENST00000508171 PIFOQ8TCI5 191 aa8.39□□□□□ -1.07
LIN54-207ENST00000508171 RNF185Q96GF1 192 aa8.39□□□□□ -1.07
LIN54-207ENST00000508171 PPP1R14DQ9NXH3 145 aa8.39□□□□□ -1.07
LIN54-207ENST00000508171 PKD1L2Q7Z442 2459 aa8.39□□□□□ -1.07
LIN54-207ENST00000508171 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.39□□□□□ -1.079e-8■■■■■ 29.1
LIN54-207ENST00000508171 TCF21O43680 179 aa8.39□□□□□ -1.07
LIN54-207ENST00000508171 S100A7P31151 101 aa8.39□□□□□ -1.07
LIN54-207ENST00000508171 RAB9AP51151 201 aa8.39□□□□□ -1.07
LIN54-207ENST00000508171 PAX8Q06710 450 aa8.39□□□□□ -1.07
LIN54-207ENST00000508171 TRBV7-1A0A0A6YYK4 115 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 IGKV3D-20A0A0C4DH25 116 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 TCTAP57738 103 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 ATP5G2Q06055 141 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 WFDC3Q8IUB2 231 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 METTL26Q96S19 204 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 PRORYQ9H606 182 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 COX11Q9Y6N1 276 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 GATA1P15976 413 aaPredicted RBP8.38□□□□□ -1.07
LIN54-207ENST00000508171 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 ERASQ7Z444 233 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 SLC50A1Q9BRV3 221 aa8.38□□□□□ -1.07
LIN54-207ENST00000508171 TRAV41A0A0B4J266 112 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 RBAKDNA6NC62 111 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 CCL25O15444 150 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 ORAOV1Q8WV07 137 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 CNFNQ9BYD5 112 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 MS4A6AQ9H2W1 248 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 TRAV40A0A0B4J280 105 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 IGHV4-61A0A0C4DH41 118 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 TRBV12-3P01733 135 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 EVI2AP22794 236 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 PCP4P48539 62 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 SRSF2Q01130 221 aaKnown RBP8.37□□□□□ -1.07
LIN54-207ENST00000508171 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 BVES-AS1Q5T3Y7 98 aa8.37□□□□□ -1.07
LIN54-207ENST00000508171 U3KQE9 123 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms