RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 LCN15Q6UWW0 184 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 CYP2G1PQ6ZSU1 146 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC16A13Q7RTY0 426 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 FAM223AQ8IWN6 122 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 IQCF2Q8IXL9 164 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 RPP25LQ8N5L8 163 aaKnown RBP1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 Q8N6K4 173 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 Q8N9W7 124 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 OR10W1Q8NGF6 305 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 OR51G1Q8NGK1 321 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 SGMS2Q8NHU3 365 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 ACY3Q96HD9 319 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM101Q96IK0 257 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 USMG5Q96IX5 58 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 BTF3L4Q96K17 158 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 MGST2Q99735 147 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 FOXC2Q99958 501 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 NIPSNAP3BQ9BS92 247 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 RSG1Q9BU20 258 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 GGTLC1Q9BX51 225 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 MAP1LC3BQ9GZQ8 125 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 SH3BGRL3Q9H299 93 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 TUBA4BQ9H853 241 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 ZNRD1Q9P1U0 126 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 GNG13Q9P2W3 67 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 CRCT1Q9UGL9 99 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 FUT9Q9Y231 359 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 CARHSP1Q9Y2V2 147 aaKnown RBP1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 PXMP4Q9Y6I8 212 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 LAMA5O15230 3695 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 DNAJC13O75165 2243 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 CACNA1CQ13936 2221 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 NAV3Q8IVL0 2385 aa1.65□□□□□ -2.14
TOPBP1-205ENST00000506779 APC2O95996 2303 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 IGLV11-55A0A075B6I3 123 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 TRAV41A0A0B4J266 112 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 TRAV40A0A0B4J280 105 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 A0A0J9YXY3 114 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 SERTM2A0A1B0GWG4 89 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 A0A1W2PRE2 83 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 A6NDX4 124 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF727A8MUV8 499 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 C11orf94C9JXX5 98 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 E7EUB6 86 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 H3BUX3 64 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 I3L2K1 104 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 K7EQM0 130 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 M0R036 132 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 PPP1R2P9O14990 202 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 OR7C2O60412 319 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 IGHG2P01859 326 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 MT-ND4LP03901 98 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 REG1AP05451 166 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 CRYBA1P05813 215 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 OR5G3P0C626 314 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 STAG3L2P0CL84 134 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 STAG3L3P0CL85 134 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 ORM2P19652 201 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 CD24P25063 80 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 S100PP25815 95 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 GCHFRP30047 84 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 BMI1P35226 326 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 SRP14P37108 136 aaKnown RBP1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 CTRLP40313 264 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 RND2P52198 227 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 PLP1P60201 277 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 ATP5G2Q06055 141 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 KLRD1Q13241 179 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 TMEM241Q24JQ0 296 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 KLK9Q2XQG4 91 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 Q56UQ5 140 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 LDLRAD2Q5SZI1 272 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 C1orf194Q5T5A4 169 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 SAMD13Q5VXD3 122 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 UNQ5815/PRO19632Q6UWF5 114 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 BRD3OSQ6XYD6 125 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 SPNS3Q6ZMD2 512 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 LINC00305Q7Z4B0 112 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 BPIFA4PQ86YQ2 179 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 LYPD1Q8N2G4 141 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 TMEM86BQ8N661 226 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 C5orf56Q8N8D9 126 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 C20orf203Q8NBC4 194 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 OR5T1Q8NG75 326 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 RXFP4Q8TDU9 374 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 EEF1AKMT3Q96AZ1 226 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 TVP23CQ96ET8 276 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 SMIM12Q96EX1 92 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 GPR82Q96P67 336 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 CHRDL1Q9BU40 450 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF331Q9NQX6 463 aaPredicted RBP1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 BIN3Q9NQY0 253 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 SMCO4Q9NRQ5 59 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF355PQ9NSJ1 428 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 TMEM242Q9NWH2 141 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 C21orf62Q9NYP8 219 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 TMEM14CQ9P0S9 112 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 DOK5Q9P104 306 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 NAT8Q9UHE5 227 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 VPREB3Q9UKI3 123 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms