RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 LPAR5Q9H1C0 372 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 MED11Q9P086 117 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 NAT8BQ9UHF3 227 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 UFC1Q9Y3C8 167 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 ASB4Q9Y574 426 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 NUBP2Q9Y5Y2 271 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 FSIP2Q5CZC0 6907 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 MEGF8Q7Z7M0 2845 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 ROCK1Q13464 1354 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 ADGBQ8N7X0 1667 aa0.14□□□□□ -2.39
HMGB1P29-201ENST00000505659 MACF1Q9UPN3 7388 aaKnown RBP0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 MYH2Q9UKX2 1941 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 C3orf85A0A1B0GTC6 90 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 ARL5CA6NH57 179 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 PPP5D1E7EU14 171 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 GYPBP06028 91 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 SAA1P0DJI8 122 aaPredicted RBP0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 FABP2P12104 132 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 EVI2AP22794 236 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 RPS3P23396 243 aaKnown RBP eCLIP0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 SERPINB1P30740 379 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 SDC2P34741 201 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 TAS2R41P59536 307 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 MAXP61244 160 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 LSM3P62310 102 aaKnown RBP0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 LTC4SQ16873 150 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 CCSMST1Q4G0I0 132 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 XAF1Q6GPH4 301 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 SPINK6Q6UWN8 80 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 ZCCHC23Q6ZST2 131 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 LYG2Q86SG7 212 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 LINC00269Q8N2A0 174 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 SMIM20Q8N5G0 67 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 OR5H6Q8NGV6 325 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 CCL4L1Q8NHW4 92 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 DIRC1Q969H9 104 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 CIB3Q96Q77 187 aaPredicted RBP0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 BOLA2Q9H3K6 86 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 IL20Q9NYY1 176 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 LAMTOR2Q9Y2Q5 125 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 N4BP2Q86UW6 1770 aaPredicted RBP0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 TNCP24821 2201 aa0.13□□□□□ -2.39
HMGB1P29-201ENST00000505659 SYNMO15061 1565 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 LOC107986453A0A1B0GWG9 222 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 TRDV1A0A1B0GX56 115 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 E5RI56 91 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 FAM107AO95990 144 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 BCL2P10415 239 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 GLRXP35754 106 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 SRP9P49458 86 aaKnown RBP0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 DNAJB13P59910 316 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 SNRPD3P62318 126 aaKnown RBP0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 TRIQKQ629K1 86 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 C3orf33Q6P1S2 294 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 DCUN1D2Q6PH85 259 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 IZUMO2Q6UXV1 221 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 C3orf62Q6ZUJ4 267 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 ANGPTL5Q86XS5 388 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 TCTEX1D1Q8N7M0 179 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 CLEC2BQ92478 149 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 PRELID3AQ96N28 172 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 CCDC32Q9BV29 185 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 LRTM1Q9HBL6 345 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 OTORQ9NRC9 128 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 SYNE2Q8WXH0 6885 aaKnown RBP0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 DSTQ03001 7570 aaKnown RBP0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 ZCCHC11Q5TAX3 1644 aaKnown RBP0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 TECPR2O15040 1411 aa0.12□□□□□ -2.39
HMGB1P29-201ENST00000505659 KNTC1P50748 2209 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 BCORL1Q5H9F3 1711 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 A0A1W2PPB8 328 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 A0A1W2PRS3 328 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 MAP1LC3B2A6NCE7 125 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 IFITM5A6NNB3 132 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 KIR3DP1A8MWS1 328 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 E7EQ34 232 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 GABARAPH6UMI1 98 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 ETV6P41212 452 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 TMEM229BQ8NBD8 167 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 OR8J3Q8NGG0 315 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 CDC26Q8NHZ8 85 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 LXNQ9BS40 222 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 C19orf12Q9NSK7 152 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 GID8Q9NWU2 228 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 MRPL35Q9NZE8 188 aaKnown RBP0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 ATPIF1Q9UII2 106 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 GPR98Q8WXG9 6306 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 DLC1Q96QB1 1528 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 DSPPQ9NZW4 1301 aa0.11□□□□□ -2.39
HMGB1P29-201ENST00000505659 TCOF1Q13428 1488 aaKnown RBP0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 TRAV13-1A0A0B4J241 112 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 TRBV27A0A0K0K1C4 114 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 HIGD1CA8MV81 97 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 TMEM238C9JI98 176 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 PGRMC1O00264 195 aaKnown RBP0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 IGF2P01344 180 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 KRTAP2-3P0C7H8 128 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 S100A11P31949 105 aa0.1□□□□□ -2.39
HMGB1P29-201ENST00000505659 GTF2A1P52655 376 aaPredicted RBP0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms