RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 WFDC10AQ9H1F0 79 aa0.84□□□□□ -2.27
CHD1-203ENST00000505657 TNFSF18Q9UNG2 199 aa0.84□□□□□ -2.27
CHD1-203ENST00000505657 RFX7Q2KHR2 1363 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 CNTRLQ7Z7A1 2325 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 KIAA1107Q9UPP5 1409 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 TRAV23DV6A0A075B6W5 121 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 LOC107984640A0A0U1RRK4 108 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 PRORSD1PA6NEY8 169 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 M0QZK8 103 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 NCR3O14931 201 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 MRPS36P82909 103 aaKnown RBP0.83□□□□□ -2.28
CHD1-203ENST00000505657 TOMM20LQ6UXN7 152 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 FOXI2Q6ZQN5 318 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 ZCCHC23Q6ZST2 131 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 TMEM35BQ8NCS4 154 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 OR9Q1Q8NGQ5 310 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 BRK1Q8WUW1 75 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 CLEC2BQ92478 149 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 MCEEQ96PE7 176 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 AMELYQ99218 206 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 LXNQ9BS40 222 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 CST11Q9H112 138 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 FKBP11Q9NYL4 201 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 MYH13Q9UKX3 1938 aa0.83□□□□□ -2.28
CHD1-203ENST00000505657 BCL9O00512 1426 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 CDK5RAP2Q96SN8 1893 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 COL1A1P02452 1464 aaPredicted RBP0.82□□□□□ -2.28
CHD1-203ENST00000505657 TRAV13-1A0A0B4J241 112 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 JMJD7-PLA2G4BH0Y9G9 81 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 MAXP61244 160 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 AKAP14Q86UN6 197 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 TAC4Q86UU9 113 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 LINC00269Q8N2A0 174 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 PLPP5Q8NEB5 264 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 OR10AG1Q8NH19 301 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 CBLN4Q9NTU7 201 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 ANKRD30AQ9BXX3 1397 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 ZDBF2Q9HCK1 2354 aa0.82□□□□□ -2.28
CHD1-203ENST00000505657 FAM135BQ49AJ0 1406 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 ERBINQ96RT1 1412 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.81□□□□□ -2.28
CHD1-203ENST00000505657 IGLV3-32A0A0A0MS00 114 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 TRBV27A0A0K0K1C4 114 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 C3orf85A0A1B0GTC6 90 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 H3BMG7 143 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 TPT1P13693 172 aaKnown RBP0.81□□□□□ -2.28
CHD1-203ENST00000505657 CRYGSP22914 178 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 FOXA3P55318 350 aaPredicted RBP0.81□□□□□ -2.28
CHD1-203ENST00000505657 PRB3Q04118 309 aaPredicted RBP0.81□□□□□ -2.28
CHD1-203ENST00000505657 NEDD8Q15843 81 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 OR5AK2Q8NH90 309 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 CCL4L1Q8NHW4 92 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 SKA2Q8WVK7 121 aaPredicted RBP0.81□□□□□ -2.28
CHD1-203ENST00000505657 PSMF1Q92530 271 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 LIMD2Q9BT23 127 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 GINS2Q9Y248 185 aa0.81□□□□□ -2.28
CHD1-203ENST00000505657 A2MP01023 1474 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 KDM5CP41229 1560 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 LOC107984156A0A0G2JMH3 177 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 TRBV7-6A0A0J9YX20 115 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 TRACP01848 142 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 NBEAP1P0C6P0 100 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 EFNA4P52798 201 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 CASC2Q6XLA1 102 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 ARL17AQ8IVW1 177 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 OR51A4Q8NGJ6 313 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 HSPB11Q9Y547 144 aa0.8□□□□□ -2.28
CHD1-203ENST00000505657 MYH6P13533 1939 aa0.79□□□□□ -2.28
CHD1-203ENST00000505657 BCORL1Q5H9F3 1711 aa0.79□□□□□ -2.28
CHD1-203ENST00000505657 J3KT08 172 aa0.79□□□□□ -2.28
CHD1-203ENST00000505657 CD14P08571 375 aa0.79□□□□□ -2.28
CHD1-203ENST00000505657 TMEM229BQ8NBD8 167 aa0.79□□□□□ -2.28
CHD1-203ENST00000505657 MORN4Q8NDC4 146 aa0.79□□□□□ -2.28
CHD1-203ENST00000505657 NABP2Q9BQ15 211 aa0.79□□□□□ -2.28
CHD1-203ENST00000505657 AFDNP55196 1824 aaKnown RBP0.79□□□□□ -2.28
CHD1-203ENST00000505657 CTTNBP2Q8WZ74 1663 aa0.78□□□□□ -2.28
CHD1-203ENST00000505657 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.78□□□□□ -2.28
CHD1-203ENST00000505657 LOC107986453A0A1B0GWG9 222 aa0.78□□□□□ -2.28
CHD1-203ENST00000505657 ARL5CA6NH57 179 aa0.78□□□□□ -2.28
CHD1-203ENST00000505657 SLC25A4P12235 298 aa0.78□□□□□ -2.28
CHD1-203ENST00000505657 OR8B8Q15620 311 aa0.78□□□□□ -2.28
CHD1-203ENST00000505657 SPATA45Q537H7 98 aa0.78□□□□□ -2.28
CHD1-203ENST00000505657 OR8I2Q8N0Y5 310 aa0.78□□□□□ -2.28
CHD1-203ENST00000505657 OVOS2A0A0G2JMS6 1433 aa0.78□□□□□ -2.28
CHD1-203ENST00000505657 KIDINS220Q9ULH0 1771 aa0.78□□□□□ -2.29
CHD1-203ENST00000505657 TRAV36DV7A0A075B6V5 113 aa0.77□□□□□ -2.29
CHD1-203ENST00000505657 IGLV3-1P01715 115 aa0.77□□□□□ -2.29
CHD1-203ENST00000505657 SAA1P0DJI8 122 aaPredicted RBP0.77□□□□□ -2.29
CHD1-203ENST00000505657 SDC4P31431 198 aa0.77□□□□□ -2.29
CHD1-203ENST00000505657 RPL22P35268 128 aaKnown RBP0.77□□□□□ -2.29
CHD1-203ENST00000505657 SRP9P49458 86 aaKnown RBP0.77□□□□□ -2.29
CHD1-203ENST00000505657 BLCAPP62952 87 aa0.77□□□□□ -2.29
CHD1-203ENST00000505657 OCIAD2Q56VL3 154 aa0.77□□□□□ -2.29
CHD1-203ENST00000505657 GLIPR1L1Q6UWM5 242 aa0.77□□□□□ -2.29
CHD1-203ENST00000505657 CIB3Q96Q77 187 aaPredicted RBP0.77□□□□□ -2.29
CHD1-203ENST00000505657 LPAR5Q9H1C0 372 aa0.77□□□□□ -2.29
CHD1-203ENST00000505657 DSPPQ9NZW4 1301 aa0.77□□□□□ -2.29
CHD1-203ENST00000505657 FGD6Q6ZV73 1430 aa0.77□□□□□ -2.29
CHD1-203ENST00000505657 PLXNA2O75051 1894 aa0.76□□□□□ -2.29
CHD1-203ENST00000505657 DEGS1O15121 323 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms