RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 DOK5Q9P104 306 aa3.66□□□□□ -1.82
DEPDC1B-203ENST00000505017 LY96Q9Y6Y9 160 aa3.66□□□□□ -1.82
DEPDC1B-203ENST00000505017 MYO9AB2RTY4 2548 aa3.66□□□□□ -1.82
DEPDC1B-203ENST00000505017 PDZD2O15018 2839 aa3.66□□□□□ -1.82
DEPDC1B-203ENST00000505017 MAP1AP78559 2803 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1B-203ENST00000505017 NBPF19A0A087WUL8 3843 aa3.65□□□□□ -1.82
DEPDC1B-203ENST00000505017 TEX15Q9BXT5 2789 aa3.65□□□□□ -1.82
DEPDC1B-203ENST00000505017 ZANQ9Y493 2812 aa3.65□□□□□ -1.82
DEPDC1B-203ENST00000505017 A0A087WWC5 75 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 IGHV3-21A0A0B4J1V1 117 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 MDFIC2A0A1B0GVS7 189 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 A8MU10 97 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 ZNF727A8MUV8 499 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 C9JCJ5 164 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 H3BQ15 152 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 HMGB3O15347 200 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 IL4P05112 153 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 S100A9P06702 114 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 CTSGP08311 255 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 NBEAP1P0C6P0 100 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 HIST1H1EP10412 219 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 RPL7P18124 248 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 MEOX2P50222 304 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 TPPP2P59282 170 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 SNRPEP62304 92 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 BLCAPP62952 87 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 PDE6HQ13956 83 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 GUCA2BQ16661 112 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 C1orf194Q5T5A4 169 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 BPIFA4PQ86YQ2 179 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 OR4F17Q8NGA8 305 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 HIST1H2BAQ96A08 127 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 FXYD5Q96DB9 178 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 SMIM7Q9BQ49 75 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 SLC25A39Q9BZJ4 359 aaPredicted RBP3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 TUBA4BQ9H853 241 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 NAT8Q9UHE5 227 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 RABAC1Q9UI14 185 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 VPS13CQ709C8 3753 aa3.65□□□□□ -1.83
DEPDC1B-203ENST00000505017 SONP18583 2426 aaKnown RBP3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 HIVEP2P31629 2446 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 HECTD1Q9ULT8 2610 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 SERTM2A0A1B0GWG4 89 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 OR2T8A6NH00 312 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 FBLL1A6NHQ2 334 aaKnown RBP3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 ZNF98A6NK75 572 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 M0R036 132 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 NDUFA4O00483 81 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 ZNF253O75346 499 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 CD99P14209 185 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 GP9P14770 177 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 PSMB8P28062 276 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 GPR183P32249 361 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 BMI1P35226 326 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 ATP5G3P48201 142 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 TAS2R60P59551 318 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 TMEM241Q24JQ0 296 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 TEX38Q6PEX7 206 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 SIGLECL1Q8N7X8 197 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 C5orf17Q8NAS9 161 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 MYOZ3Q8TDC0 251 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 ZNF418Q8TF45 676 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 SMIM12Q96EX1 92 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 METTL26Q96S19 204 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 CHRDL1Q9BU40 450 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 PARLQ9H300 379 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 ZNF702PQ9H963 129 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 OTORQ9NRC9 128 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 YAE1D1Q9NRH1 226 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 SMCO4Q9NRQ5 59 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 TMEM242Q9NWH2 141 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 CLEC5AQ9NY25 188 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 YTHDF2Q9Y5A9 579 aaKnown RBP3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 PUS1Q9Y606 427 aaKnown RBP eCLIP3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 SOX21Q9Y651 276 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 ACANP16112 2415 aa3.64□□□□□ -1.83
DEPDC1B-203ENST00000505017 A0A087X0K7 114 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 TRAV5A0A0B4J249 113 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 TRBV6-1A0A0K0K1D8 114 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 C7orf77A4D0Y5 90 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 GGTLC3B5MD39 225 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 K7EMT4 169 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 PPP1R2P9O14990 202 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 MRPS12O15235 138 aaKnown RBP3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 GGCTO75223 188 aaKnown RBP3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 EIF3GO75821 320 aaKnown RBP eCLIP3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 MT-ND4LP03901 98 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 OR10J4P0C629 311 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 IGLC2P0DOY2 106 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 CRYBB3P26998 211 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 ARL3P36405 182 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 MYCNOSP40205 109 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 GALR1P47211 349 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 CNN1P51911 297 aaKnown RBP3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 CEBPGP53567 150 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 UBE2G2P60604 165 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 PSG9Q00887 426 aa3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 USF2Q15853 346 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1B-203ENST00000505017 SAMD13Q5VXD3 122 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms