RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 Q8TAT8 98 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 FAM110DQ8TAY7 271 aaPredicted RBP11.61□□□□□ -0.55
SNF8-203ENST00000504000 MRPL53Q96EL3 112 aaKnown RBP11.61□□□□□ -0.55
SNF8-203ENST00000504000 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
SNF8-203ENST00000504000 APC2O95996 2303 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 BUB3O43684 328 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 ORM1P02763 201 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 COTL1Q14019 142 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 C11orf71Q6IPW1 123 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 PRSS57Q6UWY2 283 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 ZNF502Q8TBZ5 544 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 HIF1ANQ9NWT6 349 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 ACACAQ13085 2346 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 LAMA5O15230 3695 aa11.6□□□□□ -0.55
SNF8-203ENST00000504000 SMKR1H3BMG3 65 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 TNFRSF6BO95407 300 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 TMEM11P17152 192 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 ZFAND3Q9H8U3 227 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 HHLA3Q9XRX5 114 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 KALRNO60229 2985 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 K7EP34 96 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 ATP5LO75964 103 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 EVI2AP22794 236 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 KIR3DS1Q14943 382 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 ODF1Q14990 250 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 SMIM15Q7Z3B0 74 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 DYNAPQ8N1N2 210 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 MSRB2Q9Y3D2 182 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 AKAP13Q12802 2813 aa11.59□□□□□ -0.55
SNF8-203ENST00000504000 PRB4P10163 310 aaPredicted RBP11.58□□□□□ -0.56
SNF8-203ENST00000504000 Q8N8P6 123 aa11.58□□□□□ -0.56
SNF8-203ENST00000504000 Q8N9W7 124 aa11.58□□□□□ -0.56
SNF8-203ENST00000504000 DKK2Q9UBU2 259 aa11.58□□□□□ -0.56
SNF8-203ENST00000504000 A0A0G2JLM5 398 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 GOSR1O95249 250 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 LEPP41159 167 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 RNF151Q2KHN1 245 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 OR5A1Q8NGJ0 315 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 MSRB1Q9NZV6 116 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 IGLV2-18A0A075B6J9 118 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 IGHV4-4A0A075B6R2 117 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 FAM90A27PA6NNH2 459 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 IGHV3-23P01764 117 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 NBL1P41271 181 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 IL17RELQ6ZVW7 336 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 PCP2Q8IVA1 136 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 OR2K2Q8NGT1 345 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 ATP6V0BQ99437 205 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 VPS25Q9BRG1 176 aa11.57□□□□□ -0.56
SNF8-203ENST00000504000 NMUP48645 174 aa11.56□□□□□ -0.56
SNF8-203ENST00000504000 FXYD7P58549 80 aa11.56□□□□□ -0.56
SNF8-203ENST00000504000 DTX2Q86UW9 622 aa11.56□□□□□ -0.56
SNF8-203ENST00000504000 H3BUT2 72 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 IGKCP01834 107 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 GRNP28799 593 aaKnown RBP11.55□□□□□ -0.56
SNF8-203ENST00000504000 UQCRFS1P47985 274 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 SRSF1Q07955 248 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNF8-203ENST00000504000 C15orf32Q32M92 178 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 SIRPDQ9H106 197 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 DMXL2Q8TDJ6 3036 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 ANKHD1Q8IWZ3 2542 aaKnown RBP11.55□□□□□ -0.56
SNF8-203ENST00000504000 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 A0A1W2PPM0 123 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 PRAC2D3DTV9 90 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 LY6HO94772 140 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 IGFL4Q6B9Z1 124 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 JMJD8Q96S16 334 aa11.55□□□□□ -0.56
SNF8-203ENST00000504000 TPRP12270 2363 aaKnown RBP11.54□□□□□ -0.56
SNF8-203ENST00000504000 PIEZO2Q9H5I5 2752 aa11.54□□□□□ -0.56
SNF8-203ENST00000504000 CLPSL1A2RUU4 121 aa11.54□□□□□ -0.56
SNF8-203ENST00000504000 CLEC3BP05452 202 aa11.54□□□□□ -0.56
SNF8-203ENST00000504000 C9orf47Q6ZRZ4 202 aa11.54□□□□□ -0.56
SNF8-203ENST00000504000 AGPAT4-IT1Q9H0P7 198 aa11.54□□□□□ -0.56
SNF8-203ENST00000504000 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 A0A1W2PRD5 423 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 A0A1W2PRF3 423 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 A0A1W2PRM7 423 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 DPM2O94777 84 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 PRSS1P07477 247 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 UBE2E1P51965 193 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 ERCC8Q13216 396 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 LENEPQ9Y5L5 61 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 U3KQE9 123 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 ATMQ13315 3056 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 CCL21O00585 134 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 TMEM78Q5T7P6 136 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 NEGR1Q7Z3B1 354 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 C18orf15Q96N68 181 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 TM2D2Q9BX73 214 aa11.53□□□□□ -0.56
SNF8-203ENST00000504000 GAS8-AS1O95177 125 aa11.52□□□□□ -0.57
SNF8-203ENST00000504000 CSTL1Q9H114 145 aa11.52□□□□□ -0.57
SNF8-203ENST00000504000 TRAV8-2A0A0B4J237 113 aa11.51□□□□□ -0.57
SNF8-203ENST00000504000 IGHV7-4-1A0A0J9YVY3 117 aa11.51□□□□□ -0.57
SNF8-203ENST00000504000 SMIM17P0DL12 118 aa11.51□□□□□ -0.57
SNF8-203ENST00000504000 FABP2P12104 132 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms