RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 LYZL1Q6UWQ5 148 aa17.23■□□□□ 0.35
PCDH1-204ENST00000503492 GLMPQ8WWB7 406 aa17.23■□□□□ 0.35
PCDH1-204ENST00000503492 MAP1AP78559 2803 aaPredicted RBP17.23■□□□□ 0.35
PCDH1-204ENST00000503492 NDUFA4O00483 81 aa17.22■□□□□ 0.35
PCDH1-204ENST00000503492 TGFAP01135 160 aa17.22■□□□□ 0.35
PCDH1-204ENST00000503492 IGLV1-40P01703 118 aa17.22■□□□□ 0.35
PCDH1-204ENST00000503492 IGHV4-59P01825 116 aa17.22■□□□□ 0.35
PCDH1-204ENST00000503492 A0A1B0GW15 77 aa17.22■□□□□ 0.35
PCDH1-204ENST00000503492 M0QZ24 198 aa17.22■□□□□ 0.35
PCDH1-204ENST00000503492 BMI1P35226 326 aa17.22■□□□□ 0.35
PCDH1-204ENST00000503492 REC114Q7Z4M0 266 aa17.22■□□□□ 0.35
PCDH1-204ENST00000503492 SMAD7O15105 426 aaKnown RBP17.21■□□□□ 0.35
PCDH1-204ENST00000503492 CFHR3Q02985 330 aa17.21■□□□□ 0.35
PCDH1-204ENST00000503492 ZNF575Q86XF7 245 aa17.21■□□□□ 0.35
PCDH1-204ENST00000503492 ANKRD17O75179 2603 aaKnown RBP17.21■□□□□ 0.35
PCDH1-204ENST00000503492 UBR5O95071 2799 aaPredicted RBP17.21■□□□□ 0.35
PCDH1-204ENST00000503492 KIR2DL5BA0A0G2JN68 375 aa17.21■□□□□ 0.34
PCDH1-204ENST00000503492 KIR2DL5BA0A0G2JPC4 375 aa17.21■□□□□ 0.34
PCDH1-204ENST00000503492 C3orf79P0CE67 100 aa17.21■□□□□ 0.34
PCDH1-204ENST00000503492 KIR2DL5AQ8N109 375 aa17.21■□□□□ 0.34
PCDH1-204ENST00000503492 OR4X2Q8NGF9 303 aa17.21■□□□□ 0.34
PCDH1-204ENST00000503492 BORCS7Q96B45 105 aa17.21■□□□□ 0.34
PCDH1-204ENST00000503492 RNF223E7ERA6 249 aa17.2■□□□□ 0.34
PCDH1-204ENST00000503492 J3QLI3 93 aa17.2■□□□□ 0.34
PCDH1-204ENST00000503492 AGPAT4-IT1Q9H0P7 198 aa17.2■□□□□ 0.34
PCDH1-204ENST00000503492 LRRK2Q5S007 2527 aa17.2■□□□□ 0.34
PCDH1-204ENST00000503492 M0R2Z0 102 aa17.2■□□□□ 0.34
PCDH1-204ENST00000503492 TMEM95Q3KNT9 176 aa17.2■□□□□ 0.34
PCDH1-204ENST00000503492 IL17RELQ6ZVW7 336 aa17.2■□□□□ 0.34
PCDH1-204ENST00000503492 MRPL53Q96EL3 112 aaKnown RBP17.2■□□□□ 0.34
PCDH1-204ENST00000503492 SSTP61278 116 aa17.18■□□□□ 0.34
PCDH1-204ENST00000503492 LOXL1Q08397 574 aaPredicted RBP17.18■□□□□ 0.34
PCDH1-204ENST00000503492 TMEM213A2RRL7 107 aa17.18■□□□□ 0.34
PCDH1-204ENST00000503492 RPS20P60866 119 aaKnown RBP17.18■□□□□ 0.34
PCDH1-204ENST00000503492 ZNF493Q6ZR52 646 aa17.18■□□□□ 0.34
PCDH1-204ENST00000503492 PSMG3-AS1Q96PY0 264 aa17.18■□□□□ 0.34
PCDH1-204ENST00000503492 POLQO75417 2590 aa17.17■□□□□ 0.34
PCDH1-204ENST00000503492 FABP5P3A8MUU1 101 aa17.17■□□□□ 0.34
PCDH1-204ENST00000503492 C16orf92Q96LL3 132 aa17.17■□□□□ 0.34
PCDH1-204ENST00000503492 NDUFAF3Q9BU61 184 aa17.17■□□□□ 0.34
PCDH1-204ENST00000503492 MUC21A0A0G2JKD1 596 aa17.17■□□□□ 0.34
PCDH1-204ENST00000503492 MUC21A0A140T8X8 626 aa17.17■□□□□ 0.34
PCDH1-204ENST00000503492 SRSF2Q01130 221 aaKnown RBP17.17■□□□□ 0.34
PCDH1-204ENST00000503492 MUC21Q5SSG8 566 aa17.17■□□□□ 0.34
PCDH1-204ENST00000503492 USP9YO00507 2555 aaPredicted RBP17.16■□□□□ 0.34
PCDH1-204ENST00000503492 A0A0G2JLM5 398 aa17.16■□□□□ 0.34
PCDH1-204ENST00000503492 FAM181BA6NEQ2 426 aa17.16■□□□□ 0.34
PCDH1-204ENST00000503492 IGLC6P0CF74 106 aa17.16■□□□□ 0.34
PCDH1-204ENST00000503492 GPHB5Q86YW7 130 aa17.16■□□□□ 0.34
PCDH1-204ENST00000503492 ORM1P02763 201 aa17.16■□□□□ 0.34
PCDH1-204ENST00000503492 FER1L6-AS1Q8NA97 138 aa17.16■□□□□ 0.34
PCDH1-204ENST00000503492 CHCHD1Q96BP2 118 aaKnown RBP17.16■□□□□ 0.34
PCDH1-204ENST00000503492 ZNF580Q9UK33 172 aa17.16■□□□□ 0.34
PCDH1-204ENST00000503492 IGHV4-31P0DP07 118 aa17.15■□□□□ 0.34
PCDH1-204ENST00000503492 CTRLP40313 264 aa17.15■□□□□ 0.34
PCDH1-204ENST00000503492 PMCHL1Q16048 86 aa17.15■□□□□ 0.34
PCDH1-204ENST00000503492 EBLN2Q6P2I7 272 aa17.15■□□□□ 0.34
PCDH1-204ENST00000503492 NPFFR1Q9GZQ6 430 aa17.15■□□□□ 0.34
PCDH1-204ENST00000503492 LINC00614P0C842 121 aa17.15■□□□□ 0.34
PCDH1-204ENST00000503492 ZNF138P52744 262 aa17.15■□□□□ 0.34
PCDH1-204ENST00000503492 C20orf173Q96LM9 149 aa17.15■□□□□ 0.34
PCDH1-204ENST00000503492 PAM16Q9Y3D7 125 aa17.15■□□□□ 0.34
PCDH1-204ENST00000503492 TMEM78Q5T7P6 136 aa17.14■□□□□ 0.33
PCDH1-204ENST00000503492 C9orf47Q6ZRZ4 202 aa17.14■□□□□ 0.33
PCDH1-204ENST00000503492 C9orf139Q6ZV77 190 aa17.14■□□□□ 0.33
PCDH1-204ENST00000503492 VAMP8Q9BV40 100 aa17.14■□□□□ 0.33
PCDH1-204ENST00000503492 DEFB113Q30KQ7 82 aa17.14■□□□□ 0.33
PCDH1-204ENST00000503492 CR1P17927 2039 aa17.13■□□□□ 0.33
PCDH1-204ENST00000503492 LINC01559Q495D7 138 aa17.13■□□□□ 0.33
PCDH1-204ENST00000503492 CLEC5AQ9NY25 188 aa17.13■□□□□ 0.33
PCDH1-204ENST00000503492 IGHV1-24A0A0C4DH33 117 aa17.13■□□□□ 0.33
PCDH1-204ENST00000503492 FSHBP01225 129 aa17.13■□□□□ 0.33
PCDH1-204ENST00000503492 C20orf144Q9BQM9 153 aa17.13■□□□□ 0.33
PCDH1-204ENST00000503492 PTPN13Q12923 2485 aa17.12■□□□□ 0.33
PCDH1-204ENST00000503492 C2orf70A6NJV1 201 aa17.12■□□□□ 0.33
PCDH1-204ENST00000503492 BEX4Q9NWD9 120 aaPredicted RBP17.12■□□□□ 0.33
PCDH1-204ENST00000503492 SOCS3O14543 225 aa17.11■□□□□ 0.33
PCDH1-204ENST00000503492 CSN3P07498 182 aa17.11■□□□□ 0.33
PCDH1-204ENST00000503492 PSMB8P28062 276 aa17.11■□□□□ 0.33
PCDH1-204ENST00000503492 FAM104BQ5XKR9 115 aa17.11■□□□□ 0.33
PCDH1-204ENST00000503492 C10orf99Q6UWK7 81 aa17.11■□□□□ 0.33
PCDH1-204ENST00000503492 AMN1Q8IY45 258 aa17.11■□□□□ 0.33
PCDH1-204ENST00000503492 TM4SF20Q53R12 229 aa17.11■□□□□ 0.33
PCDH1-204ENST00000503492 C11orf21Q9P2W6 132 aa17.11■□□□□ 0.33
PCDH1-204ENST00000503492 EPG5Q9HCE0 2579 aa17.11■□□□□ 0.33
PCDH1-204ENST00000503492 Q5PR19 223 aa17.1■□□□□ 0.33
PCDH1-204ENST00000503492 PPP1R14DQ9NXH3 145 aa17.1■□□□□ 0.33
PCDH1-204ENST00000503492 PEF1Q9UBV8 284 aaKnown RBP17.1■□□□□ 0.33
PCDH1-204ENST00000503492 IGKV3D-20A0A0C4DH25 116 aa17.1■□□□□ 0.33
PCDH1-204ENST00000503492 TWIST1Q15672 202 aa17.1■□□□□ 0.33
PCDH1-204ENST00000503492 ZNF738Q8NE65 137 aa17.1■□□□□ 0.33
PCDH1-204ENST00000503492 IGHV7-4-1A0A0J9YVY3 117 aa17.09■□□□□ 0.33
PCDH1-204ENST00000503492 BTF3P20290 206 aaKnown RBP17.09■□□□□ 0.33
PCDH1-204ENST00000503492 HIST1H1AQ02539 215 aaPredicted RBP17.09■□□□□ 0.33
PCDH1-204ENST00000503492 RHPN1-AS1Q9BWJ2 59 aa17.09■□□□□ 0.33
PCDH1-204ENST00000503492 U3KQK5 164 aa17.09■□□□□ 0.33
PCDH1-204ENST00000503492 D6R8Y8 96 aa17.08■□□□□ 0.33
PCDH1-204ENST00000503492 LRRC75A-AS1Q8N1F1 130 aa17.08■□□□□ 0.33
PCDH1-204ENST00000503492 CNFNQ9BYD5 112 aa17.08■□□□□ 0.33
PCDH1-204ENST00000503492 DMRTA1Q5VZB9 504 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms