RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 STAG3L2P0CL84 134 aa8.09□□□□□ -1.11
ERCC8-208ENST00000497892 STAG3L3P0CL85 134 aa8.09□□□□□ -1.11
ERCC8-208ENST00000497892 ARL14EPLP0DKL9 152 aa8.09□□□□□ -1.11
ERCC8-208ENST00000497892 RANP62826 216 aaKnown RBP8.09□□□□□ -1.11
ERCC8-208ENST00000497892 PMS2P11Q13670 270 aa8.09□□□□□ -1.11
ERCC8-208ENST00000497892 RAB24Q969Q5 203 aa8.09□□□□□ -1.11
ERCC8-208ENST00000497892 ST6GAL2Q96JF0 529 aa8.09□□□□□ -1.11
ERCC8-208ENST00000497892 ARPC5LQ9BPX5 153 aa8.09□□□□□ -1.11
ERCC8-208ENST00000497892 KRTAP4-9Q9BYQ8 210 aa8.09□□□□□ -1.11
ERCC8-208ENST00000497892 TMEM189A5PLL7 270 aa8.08□□□□□ -1.12
ERCC8-208ENST00000497892 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
ERCC8-208ENST00000497892 HMGB3O15347 200 aaKnown RBP8.08□□□□□ -1.12
ERCC8-208ENST00000497892 HBE1P02100 147 aa8.08□□□□□ -1.12
ERCC8-208ENST00000497892 CT45A10P0DMU9 189 aa8.08□□□□□ -1.12
ERCC8-208ENST00000497892 TSPOP30536 169 aa8.08□□□□□ -1.12
ERCC8-208ENST00000497892 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
ERCC8-208ENST00000497892 C9orf47Q6ZRZ4 202 aa8.08□□□□□ -1.12
ERCC8-208ENST00000497892 TCTE3Q8IZS6 198 aa8.08□□□□□ -1.12
ERCC8-208ENST00000497892 TMEM208Q9BTX3 173 aa8.08□□□□□ -1.12
ERCC8-208ENST00000497892 ACTR3CQ9C0K3 210 aaPredicted RBP8.08□□□□□ -1.12
ERCC8-208ENST00000497892 Q9H3A6 140 aa8.08□□□□□ -1.12
ERCC8-208ENST00000497892 IGKV2-40A0A087WW87 121 aaPredicted RBP8.07□□□□□ -1.12
ERCC8-208ENST00000497892 A0A0D9SG52 128 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 BCL2L11O43521 198 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 IGKV2D-40P01614 121 aaPredicted RBP8.07□□□□□ -1.12
ERCC8-208ENST00000497892 LEPP41159 167 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 RRN3P1Q2M238 152 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 KRTAP19-4Q3LI73 84 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 GFI1BQ5VTD9 330 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 SSX7Q7RTT5 188 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 TMEM256Q8N2U0 113 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 FAM19A4Q96LR4 140 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 LINC00477Q96M19 166 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 C20orf144Q9BQM9 153 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 OTORQ9NRC9 128 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 CELA1Q9UNI1 258 aa8.07□□□□□ -1.12
ERCC8-208ENST00000497892 DYNC2H1Q8NCM8 4307 aaKnown RBP8.07□□□□□ -1.12
ERCC8-208ENST00000497892 LOC102723971A0A1B0GUV8 181 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 RBAKDNA6NC62 111 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 H3BS24 57 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 GCHFRP30047 84 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 CSN1S1P47710 185 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 ERCC8Q13216 396 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 KIR3DS1Q14943 382 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 ZNF726P1Q15940 193 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 CEMP1Q6PRD7 247 aaPredicted RBP8.06□□□□□ -1.12
ERCC8-208ENST00000497892 SUN5Q8TC36 379 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 RXFP4Q8TDU9 374 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 PHLDA1Q8WV24 401 aaPredicted RBP8.06□□□□□ -1.12
ERCC8-208ENST00000497892 AGPAT4-IT1Q9H0P7 198 aa8.06□□□□□ -1.12
ERCC8-208ENST00000497892 hCG_2014768A0A024R1R8 64 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 CTXND1A0A1B0GTU2 59 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 KANTRA0A1W2PQU2 76 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 KLLNB2CW77 178 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 DIRC3C9JPN6 131 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 H7BYZ3 331 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 CXorf1O96002 111 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 SLC25A5P05141 298 aaKnown RBP8.05□□□□□ -1.12
ERCC8-208ENST00000497892 CRISP2P16562 243 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 EMP1P54849 157 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 TAS2R60P59551 318 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 FAM74A1Q5RGS3 127 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 AKR1C8PQ5T2L2 129 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 TMEM78Q5T7P6 136 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 VGLL1Q99990 258 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 ZNF471Q9BX82 626 aaPredicted RBP8.05□□□□□ -1.12
ERCC8-208ENST00000497892 TMEM167BQ9NRX6 74 aa8.05□□□□□ -1.12
ERCC8-208ENST00000497892 TRBV7-9A0A0J9YWB2 115 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 TEX48A0A1B0GUV7 120 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 ZNF705GA8MUZ8 300 aaPredicted RBP8.04□□□□□ -1.12
ERCC8-208ENST00000497892 PFDN1O60925 122 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 NMBP08949 121 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 SPART-AS1P0CW21 52 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 ZNF138P52744 262 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 Q6ZTC4 211 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 TMUB2Q71RG4 321 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 AKAP14Q86UN6 197 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 ARL6IP6Q8N6S5 226 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 Q8TAT8 98 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 CMTM2Q8TAZ6 248 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 HYLS1Q96M11 299 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 LINC01587Q99440 93 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 ZNF492Q9P255 531 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 DKK2Q9UBU2 259 aa8.04□□□□□ -1.12
ERCC8-208ENST00000497892 YTHDF2Q9Y5A9 579 aaKnown RBP8.04□□□□□ -1.12
ERCC8-208ENST00000497892 LYSTQ99698 3801 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 TRAV12-3A0A0B4J271 114 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 LCE6AA0A183 80 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 PLAC8L1A1L4L8 177 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 C7orf71A4D174 169 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 PGPA6NDG6 321 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 GGTLC3B5MD39 225 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 C11orf94C9JXX5 98 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 J3KRW8 73 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 C1QBP02746 253 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 PRM2P04554 102 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 SEC11BP0C7V7 166 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 EIF5AP63241 154 aaKnown RBP8.03□□□□□ -1.12
ERCC8-208ENST00000497892 C12orf74Q32Q52 190 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 FAM222AQ5U5X8 452 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms