RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 SCTP09683 121 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 PTHLHP12272 177 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF25P17030 456 aaPredicted RBP2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST1H2BOP23527 126 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST1H2BBP33778 126 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 NOVP48745 357 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST1H2BDP58876 126 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 TSPEAR-AS2P59090 65 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST1H2BCP62807 126 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 OR8G1Q15617 311 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST2H2BEQ16778 126 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 RRN3P1Q2M238 152 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 MRPL51Q4U2R6 128 aaKnown RBP2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 LYRM7Q5U5X0 104 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 AADACL3Q5VUY0 350 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 AMTNQ6UX39 209 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 Q6ZR03 302 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 PRR15Q8IV56 129 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 OR8I2Q8N0Y5 310 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 LYG1Q8N1E2 194 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 RPP25LQ8N5L8 163 aaKnown RBP2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 C11orf42Q8N5U0 333 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 MIR7-3HGQ8N6C7 128 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 SLC30A7Q8NEW0 376 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 OR4C6Q8NH72 309 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 STAG3L4Q8TBR4 150 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 RBPMSQ93062 196 aaKnown RBP2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST1H2BHQ93079 126 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 BORCS8Q96FH0 119 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 TEX37Q96LM6 180 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST1H2BNQ99877 126 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 HIST1H2BMQ99879 126 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 DERL1Q9BUN8 251 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 RTL8AQ9BWD3 113 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 OR8D2Q9GZM6 311 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 C11orf1Q9H5F2 150 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 RNF122Q9H9V4 155 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 IL36BQ9NZH7 164 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 LAMTOR3Q9UHA4 124 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 ERG28Q9UKR5 140 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 TMEM14AQ9Y6G1 99 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 MYH8P13535 1937 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 ARHGAP21Q5T5U3 1957 aa2.36□□□□□ -2.03
EXOSC3-208ENST00000496910 A0A0D9SEW6 157 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 C9orf170A2RU37 121 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 A6NED7 52 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 LECT2O14960 151 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 GNG7O60262 68 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 TPST1O60507 370 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 IFNGP01579 166 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 TRGC2P03986 189 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 PRM2P04554 102 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 CCL3P10147 92 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 EVI2AP22794 236 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 NFYBP25208 207 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 PSMB8P28062 276 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 CASP1P29466 404 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 PSG7Q13046 419 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 NEDD8Q15843 81 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 RTL8BQ17RB0 113 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 GLYATL3Q5SZD4 288 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 C10orf91Q5T1B1 145 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 RPL22L1Q6P5R6 122 aaKnown RBP2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 C4orf22Q6V702 233 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 ISOC1Q96CN7 298 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 SLC25A21Q9BQT8 299 aaPredicted RBP2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 LPAR5Q9H1C0 372 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 VCXQ9H320 206 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 TUBA4BQ9H853 241 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 PRR34Q9NV39 138 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 FUT9Q9Y231 359 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 SMAD5-AS1Q9Y6J3 95 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 MYH11P35749 1972 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 MPDZO75970 2070 aa2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 PLECQ15149 4684 aaKnown RBP2.35□□□□□ -2.03
EXOSC3-208ENST00000496910 A0A096LNJ9 63 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 LOC107984640A0A0U1RRK4 108 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 LEUTXA8MZ59 168 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 C1orf196B1AJZ1 125 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 LY6LH3BQJ8 138 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 UBE2L6O14933 153 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 OR2T1O43869 369 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 ZNF861PO60384 105 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 IFNA10P01566 189 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 IGHV3-30-3P0DP02 117 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 NPPCP23582 126 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 ATP6V0CP27449 155 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 CSN1S1P47710 185 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 EMX2Q04743 252 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 EIF3IQ13347 325 aaKnown RBP2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 C1orf140Q5VVS0 124 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 Q5W150 140 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 TCTE3Q8IZS6 198 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 WFDC5Q8TCV5 224 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 TMEM203Q969S6 136 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 TP53RKQ96S44 253 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 UPK3BQ9BT76 320 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 TTTY13Q9BZ97 58 aa2.34□□□□□ -2.03
EXOSC3-208ENST00000496910 YIPF3Q9GZM5 350 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms