RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 GOLT1AQ6ZVE7 132 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 VGLL1Q99990 258 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 OVOL2Q9BRP0 275 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 EPDR1Q9UM22 224 aa10.77□□□□□ -0.69
HDAC9-226ENST00000496026 K7EQM0 130 aa10.76□□□□□ -0.69
HDAC9-226ENST00000496026 CT45A10P0DMU9 189 aa10.76□□□□□ -0.69
HDAC9-226ENST00000496026 CDKN1BP46527 198 aa10.76□□□□□ -0.69
HDAC9-226ENST00000496026 CCL20P78556 96 aa10.76□□□□□ -0.69
HDAC9-226ENST00000496026 ODF3Q96PU9 254 aa10.76□□□□□ -0.69
HDAC9-226ENST00000496026 GNG13Q9P2W3 67 aa10.76□□□□□ -0.69
HDAC9-226ENST00000496026 U3KQK5 164 aa10.76□□□□□ -0.69
HDAC9-226ENST00000496026 ARL2-SNX15V9GYD0 113 aa10.76□□□□□ -0.69
HDAC9-226ENST00000496026 TRAV12-2A0A075B6T6 113 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 SERTM2A0A1B0GWG4 89 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 J3KRW8 73 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 TCRAP04437 139 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 ZNF138P52744 262 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 TEX261Q6UWH6 196 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 RARRES2Q99969 163 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 MANBALQ9NQG1 85 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 GOLT1BQ9Y3E0 138 aa10.75□□□□□ -0.69
HDAC9-226ENST00000496026 IGHV3OR16-12A0A075B7B8 117 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 INSP01308 110 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 IFNA1P01562 189 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 ATP5G3P48201 142 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 CYB561D1Q8N8Q1 229 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 CSNK1G2-AS1Q8NCQ2 148 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 Q8TAT8 98 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 ATG101Q9BSB4 218 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 TMEM208Q9BTX3 173 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 ZNF492Q9P255 531 aa10.74□□□□□ -0.69
HDAC9-226ENST00000496026 AGRNO00468 2067 aa10.73□□□□□ -0.69
HDAC9-226ENST00000496026 F6UZH7 168 aa10.73□□□□□ -0.69
HDAC9-226ENST00000496026 PEX7O00628 323 aa10.73□□□□□ -0.69
HDAC9-226ENST00000496026 CRXO43186 299 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-226ENST00000496026 HIST1H2BAQ96A08 127 aa10.73□□□□□ -0.69
HDAC9-226ENST00000496026 TRAV8-1A0A0A6YYK1 113 aa10.72□□□□□ -0.69
HDAC9-226ENST00000496026 C11orf94C9JXX5 98 aa10.72□□□□□ -0.69
HDAC9-226ENST00000496026 GPX1P07203 203 aa10.72□□□□□ -0.69
HDAC9-226ENST00000496026 CCDC28AQ8IWP9 274 aa10.72□□□□□ -0.69
HDAC9-226ENST00000496026 ZNF680Q8NEM1 530 aa10.72□□□□□ -0.69
HDAC9-226ENST00000496026 FAM19A4Q96LR4 140 aa10.72□□□□□ -0.69
HDAC9-226ENST00000496026 SGK494Q96LW2 274 aa10.72□□□□□ -0.69
HDAC9-226ENST00000496026 TCEAL7Q9BRU2 100 aa10.72□□□□□ -0.69
HDAC9-226ENST00000496026 KIR3DS1Q14943 382 aa10.71□□□□□ -0.69
HDAC9-226ENST00000496026 GFI1BQ5VTD9 330 aa10.71□□□□□ -0.69
HDAC9-226ENST00000496026 C1orf158Q8N1D5 194 aa10.71□□□□□ -0.69
HDAC9-226ENST00000496026 NDFIP1Q9BT67 221 aa10.71□□□□□ -0.69
HDAC9-226ENST00000496026 PSG8Q9UQ74 426 aa10.71□□□□□ -0.69
HDAC9-226ENST00000496026 LENEPQ9Y5L5 61 aa10.71□□□□□ -0.69
HDAC9-226ENST00000496026 TRAV34A0A0B4J273 112 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 C7orf71A4D174 169 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 FBLL1A6NHQ2 334 aaKnown RBP10.7□□□□□ -0.7
HDAC9-226ENST00000496026 NMBP08949 121 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 CRISP2P16562 243 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 RNASE4P34096 147 aaKnown RBP10.7□□□□□ -0.7
HDAC9-226ENST00000496026 FLI1Q01543 452 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-226ENST00000496026 ZNF705AQ6ZN79 300 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-226ENST00000496026 PRNTQ86SH4 94 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 TMEM256Q8N2U0 113 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 TMEM75Q8N9X5 138 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 LINC01587Q99440 93 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 C20orf144Q9BQM9 153 aa10.7□□□□□ -0.7
HDAC9-226ENST00000496026 TRAV12-3A0A0B4J271 114 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 SCO2A0A1W2PP80 73 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 KLLNB2CW77 178 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 BCL2P10415 239 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 MIFP14174 115 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 TAGLN2P37802 199 aaKnown RBP10.69□□□□□ -0.7
HDAC9-226ENST00000496026 AKR1C3P42330 323 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 UBE2G1P62253 170 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 BTN1A1Q13410 526 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 PMS2P11Q13670 270 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 ZFAND2AQ8N6M9 145 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 LYPD6BQ8NI32 183 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 TXNDC17Q9BRA2 123 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 NIPSNAP3BQ9BS92 247 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 TREM1Q9NP99 234 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 VAX2Q9UIW0 290 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 X6R8D5 127 aa10.69□□□□□ -0.7
HDAC9-226ENST00000496026 PRKDCP78527 4128 aaKnown RBP10.69□□□□□ -0.7
HDAC9-226ENST00000496026 SMIM9A6NGZ8 99 aa10.68□□□□□ -0.7
HDAC9-226ENST00000496026 IGLV2-11P01706 119 aa10.68□□□□□ -0.7
HDAC9-226ENST00000496026 RBMY1A1P0DJD3 496 aaKnown RBP10.68□□□□□ -0.7
HDAC9-226ENST00000496026 RBMY1CP0DJD4 496 aa10.68□□□□□ -0.7
HDAC9-226ENST00000496026 HTN1P15515 57 aa10.68□□□□□ -0.7
HDAC9-226ENST00000496026 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
HDAC9-226ENST00000496026 PRR9Q5T870 116 aa10.68□□□□□ -0.7
HDAC9-226ENST00000496026 PCNPQ8WW12 178 aaKnown RBP10.68□□□□□ -0.7
HDAC9-226ENST00000496026 FMC1Q96HJ9 113 aa10.68□□□□□ -0.7
HDAC9-226ENST00000496026 NEU1Q99519 415 aa10.68□□□□□ -0.7
HDAC9-226ENST00000496026 IGHV4-28A0A0C4DH34 117 aa10.67□□□□□ -0.7
HDAC9-226ENST00000496026 A0A0J9YWU9 116 aa10.67□□□□□ -0.7
HDAC9-226ENST00000496026 ZNF705GA8MUZ8 300 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-226ENST00000496026 H7BYZ3 331 aa10.67□□□□□ -0.7
HDAC9-226ENST00000496026 MEF2BQ02080 365 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms