RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 FAM106AQ4KMX7 169 aa8.65□□□□□ -1.02
CHMP3-209ENST00000494623 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.65□□□□□ -1.02
CHMP3-209ENST00000494623 ZNF493Q6ZR52 646 aa8.65□□□□□ -1.02
CHMP3-209ENST00000494623 COX8CQ7Z4L0 72 aa8.65□□□□□ -1.02
CHMP3-209ENST00000494623 FER1L6-AS1Q8NA97 138 aa8.65□□□□□ -1.02
CHMP3-209ENST00000494623 LAMTOR2Q9Y2Q5 125 aa8.65□□□□□ -1.02
CHMP3-209ENST00000494623 COL12A1Q99715 3063 aa8.65□□□□□ -1.02
CHMP3-209ENST00000494623 hDV102S1A0JD36 115 aa8.65□□□□□ -1.03
CHMP3-209ENST00000494623 C20orf202A1L168 122 aa8.65□□□□□ -1.03
CHMP3-209ENST00000494623 FBLL1A6NHQ2 334 aaKnown RBP8.65□□□□□ -1.03
CHMP3-209ENST00000494623 TSPOP30536 169 aa8.65□□□□□ -1.03
CHMP3-209ENST00000494623 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.03
CHMP3-209ENST00000494623 PMCHL2Q9BQD1 86 aa8.65□□□□□ -1.03
CHMP3-209ENST00000494623 HSPB8Q9UJY1 196 aa8.65□□□□□ -1.03
CHMP3-209ENST00000494623 CELSR1Q9NYQ6 3014 aa8.65□□□□□ -1.03
CHMP3-209ENST00000494623 TRBV7-1A0A0A6YYK4 115 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 TRAV41A0A0B4J266 112 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 TRAV40A0A0B4J280 105 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 RAB9AP51151 201 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 KLK9Q2XQG4 91 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 COL5A1-AS1Q5SY13 56 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 PRELID3AQ96N28 172 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 METTL26Q96S19 204 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 KLK9Q9UKQ9 250 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 IGHV1-69DA0A0B4J2H0 117 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 FABP5P3A8MUU1 101 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 SMKR1H3BMG3 65 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 IGHV1-69P01742 117 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 RPS20P60866 119 aaKnown RBP8.64□□□□□ -1.03
CHMP3-209ENST00000494623 LY6EQ16553 131 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 ZNF575Q86XF7 245 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 PIFOQ8TCI5 191 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 TMEM191AQ9H0A3 160 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 MOB4Q9Y3A3 225 aa8.64□□□□□ -1.03
CHMP3-209ENST00000494623 MAP1AP78559 2803 aaPredicted RBP8.63□□□□□ -1.03
CHMP3-209ENST00000494623 A0A087X0K7 114 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 PPIFP30405 207 aaKnown RBP8.63□□□□□ -1.03
CHMP3-209ENST00000494623 HINT1P49773 126 aaPredicted RBP8.63□□□□□ -1.03
CHMP3-209ENST00000494623 LOXL1Q08397 574 aaPredicted RBP8.63□□□□□ -1.03
CHMP3-209ENST00000494623 MRPL51Q4U2R6 128 aaKnown RBP8.63□□□□□ -1.03
CHMP3-209ENST00000494623 IL17RELQ6ZVW7 336 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 STPG4Q8N801 248 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 CCL19Q99731 98 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 PIMREGQ9BSJ6 248 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 MSRB1Q9NZV6 116 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 FXYD7P58549 80 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 ORMDL3Q8N138 153 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 SIGLEC8Q9NYZ4 499 aa8.63□□□□□ -1.03
CHMP3-209ENST00000494623 TRGV3P03979 118 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 CKS2P33552 79 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 OR10AG1Q8NH19 301 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 SLC50A1Q9BRV3 221 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 TMEM208Q9BTX3 173 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 AGPAT4-IT1Q9H0P7 198 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 PKD1L2Q7Z442 2459 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 TRAV8-2A0A0B4J237 113 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 IGHV4-38-2P0DP08 117 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 MRPS16Q9Y3D3 137 aaKnown RBP8.62□□□□□ -1.03
CHMP3-209ENST00000494623 U3KQK5 164 aa8.62□□□□□ -1.03
CHMP3-209ENST00000494623 HSBP1L1C9JCN9 74 aa8.61□□□□□ -1.03
CHMP3-209ENST00000494623 NCR2O95944 276 aa8.61□□□□□ -1.03
CHMP3-209ENST00000494623 IGLC6P0CF74 106 aa8.61□□□□□ -1.03
CHMP3-209ENST00000494623 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
CHMP3-209ENST00000494623 ZNF747Q9BV97 191 aa8.61□□□□□ -1.03
CHMP3-209ENST00000494623 SPG11Q96JI7 2443 aa8.61□□□□□ -1.03
CHMP3-209ENST00000494623 DMRTA1Q5VZB9 504 aa8.61□□□□□ -1.03
CHMP3-209ENST00000494623 C8orf86Q6ZUL3 223 aa8.61□□□□□ -1.03
CHMP3-209ENST00000494623 ABCA2Q9BZC7 2435 aa8.61□□□□□ -1.03
CHMP3-209ENST00000494623 ATP5J2P56134 94 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 OR8A1Q8NGG7 326 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 C10orf105Q8TEF2 133 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 GOLT1BQ9Y3E0 138 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 NPYP01303 97 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 TRBV12-3P01733 135 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 ARL3P36405 182 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 TMEM78Q5T7P6 136 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 C16orf92Q96LL3 132 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 ST20Q9HBF5 79 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 IGHV4-30-2A0A087WSY4 118 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 H3BUX3 64 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 DLEU1O43261 78 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 MEGF9Q9H1U4 602 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 U3KQE9 123 aa8.6□□□□□ -1.03
CHMP3-209ENST00000494623 A0A096LNJ9 63 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 FAM223BA6NKX1 122 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 IGHV3-11P01762 117 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
CHMP3-209ENST00000494623 PRSS57Q6UWY2 283 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 Q6ZQT7 251 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 FAM223AQ8IWN6 122 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 C11orf21Q9P2W6 132 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 IGKV3D-20A0A0C4DH25 116 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 GAS8-AS1O95177 125 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 BLCAPP62952 87 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 C19orf54Q5BKX5 351 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
CHMP3-209ENST00000494623 UNQ9165/PRO28630Q6UXU0 137 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms