RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 IGHV3OR16-13A0A075B7E8 117 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 IGHV3-49A0A0A0MS15 119 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 IGHV3-74A0A0B4J1X5 117 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 IGHV3-66A0A0C4DH42 116 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 LOC105371267A0A1B0GV96 52 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 A8MTW9 85 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 ZNF705FA8MVS1 300 aaPredicted RBP5.11□□□□□ -1.59
MSH5-217ENST00000494458 K7EQG2 157 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 CSN3P07498 182 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 EDN2P20800 178 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 S100PP25815 95 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 FAM3BP58499 235 aaPredicted RBP5.11□□□□□ -1.59
MSH5-217ENST00000494458 IGFL4Q6B9Z1 124 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 KCNIP4Q6PIL6 250 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 RASL11AQ6T310 242 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 Q71RC1 249 aaPredicted RBP5.11□□□□□ -1.59
MSH5-217ENST00000494458 OR11H1Q8NG94 326 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 OR1N2Q8NGR9 330 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 TSKUQ8WUA8 353 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 ZC2HC1AQ96GY0 325 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 LINC00477Q96M19 166 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 TSSC4Q9Y5U2 329 aaPredicted RBP5.11□□□□□ -1.59
MSH5-217ENST00000494458 URGCP-MRPS24S4R325 110 aa5.11□□□□□ -1.59
MSH5-217ENST00000494458 IGKV2-40A0A087WW87 121 aaPredicted RBP5.1□□□□□ -1.59
MSH5-217ENST00000494458 A0A1B0GUS0 222 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 IZUMO1RA6ND01 250 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 INAFM1C9JVW0 142 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 OVOL1O14753 267 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 GATCO43716 136 aaKnown RBP5.1□□□□□ -1.59
MSH5-217ENST00000494458 IGKV2D-40P01614 121 aaPredicted RBP5.1□□□□□ -1.59
MSH5-217ENST00000494458 CD28P10747 220 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 CRISP2P16562 243 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 SYNJ2BPP57105 145 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 COX19Q49B96 90 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 COA6Q5JTJ3 125 aaKnown RBP5.1□□□□□ -1.59
MSH5-217ENST00000494458 TCF24Q7RTU0 167 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 PRNTQ86SH4 94 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.1□□□□□ -1.59
MSH5-217ENST00000494458 GATD1Q8NB37 220 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 NHLRC2Q8NBF2 726 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 OR9G4Q8NGQ1 327 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 GTSF1Q8WW33 167 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 DLX4Q92988 240 aaPredicted RBP5.1□□□□□ -1.59
MSH5-217ENST00000494458 RAX2Q96IS3 184 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 SGK494Q96LW2 274 aa5.1□□□□□ -1.59
MSH5-217ENST00000494458 SAV1Q9H4B6 383 aaPredicted RBP5.1□□□□□ -1.59
MSH5-217ENST00000494458 FLNBO75369 2602 aaKnown RBP5.1□□□□□ -1.59
MSH5-217ENST00000494458 A0A1B0GXF2 115 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 C5orf52A6NGY3 159 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 ZNF705GA8MUZ8 300 aaPredicted RBP5.09□□□□□ -1.59
MSH5-217ENST00000494458 A8MWL6 223 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 C1orf196B1AJZ1 125 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 TCF21O43680 179 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 MGST1P10620 155 aaKnown RBP5.09□□□□□ -1.59
MSH5-217ENST00000494458 RPS10P46783 165 aaKnown RBP5.09□□□□□ -1.59
MSH5-217ENST00000494458 ZNF80P51504 273 aaPredicted RBP5.09□□□□□ -1.59
MSH5-217ENST00000494458 ZNF138P52744 262 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 SLURP1P55000 103 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 KRTAP10-3P60369 221 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 DEFB114Q30KQ6 69 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 ACTL10Q5JWF8 245 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 ATP5L2Q7Z4Y8 100 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 RNF182Q8N6D2 247 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 NUP35Q8NFH5 326 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 C16orf92Q96LL3 132 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 ODF3Q96PU9 254 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 CITED2Q99967 270 aaPredicted RBP5.09□□□□□ -1.59
MSH5-217ENST00000494458 GNB1LQ9BYB4 327 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 GPR61Q9BZJ8 451 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 MS4A6AQ9H2W1 248 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 RPP21Q9H633 154 aaKnown RBP5.09□□□□□ -1.59
MSH5-217ENST00000494458 PEMTQ9UBM1 199 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 NAT8BQ9UHF3 227 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 RNF114Q9Y508 228 aa5.09□□□□□ -1.59
MSH5-217ENST00000494458 TRAV25A0A0B4J276 109 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 A0A1W2PPQ1 181 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 FABP5P3A8MUU1 101 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 CCL24O00175 119 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H2BKO60814 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 P01737 135 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 TRGC2P03986 189 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H2BJP06899 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 FRMD6-AS1P0C7T7 363 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 CT45A10P0DMU9 189 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H2BOP23527 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H2BBP33778 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 ID1P41134 155 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H2BDP58876 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 RAB5BP61020 215 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST1H2BCP62807 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 ERCC8Q13216 396 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST2H2BEQ16778 126 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 DEFB136Q30KP8 78 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 SMUG1Q53HV7 270 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.08□□□□□ -1.6
MSH5-217ENST00000494458 FAM162BQ5T6X4 162 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 GBGT1Q8N5D6 347 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 ZFAND2AQ8N6M9 145 aa5.08□□□□□ -1.6
MSH5-217ENST00000494458 KLHL30-AS1Q8NEE0 82 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms