RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 MAP1LC3AQ9H492 121 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 AAMDCQ9H7C9 122 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 J3QR89 54 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 IGKCP01834 107 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 LOXP28300 417 aaPredicted RBP15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 RNF125Q96EQ8 232 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 MALRD1Q5VYJ5 2156 aa15.14■□□□□ 0.01
SNAPC3-206ENST00000490969 A0A1W2PRD5 423 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 A0A1W2PRF3 423 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 A0A1W2PRM7 423 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 IL4P05112 153 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 PRSS1P07477 247 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 FCER1GP30273 86 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 LRBAP50851 2863 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 A0A1B0GV72 72 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 LINC01546A6NGU7 62 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 ZNF207O43670 478 aaKnown RBP15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 EGR2P11161 476 aaPredicted RBP15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 EVI2AP22794 236 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 TMEM155Q4W5P6 130 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 GTSCR1Q86UQ5 136 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 FBXL15Q9H469 300 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 CTSZQ9UBR2 303 aa15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 SPTBN1Q01082 2364 aaKnown RBP15.13■□□□□ 0.01
SNAPC3-206ENST00000490969 C17orf100A8MU93 164 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 VSTM5A8MXK1 200 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 IGLL5B9A064 214 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 TMEM178BH3BS89 294 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 ABCA4P78363 2273 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 K7EIM0 57 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 K7EMI3 77 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 PLGLAQ15195 96 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 CDSNQ15517 529 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 ATP6V0BQ99437 205 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 SPATA25Q9BR10 227 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 HIVEP3Q5T1R4 2406 aa15.12■□□□□ 0.01
SNAPC3-206ENST00000490969 TMEM238LA0A1B0GVL6 79 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 PDE6HQ13956 83 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 RNF185Q96GF1 192 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 C16orf97H3BN30 126 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 GAS8-AS1O95177 125 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 IGLC6P0CF74 106 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 ZC2HC1BQ5TFG8 222 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 COX8CQ7Z4L0 72 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 NUP37Q8NFH4 326 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 CCL17Q92583 94 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 FOXC2Q99958 501 aa15.11■□□□□ 0.01
SNAPC3-206ENST00000490969 IGKV2-40A0A087WW87 121 aaPredicted RBP15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 TNFRSF13BO14836 293 aaPredicted RBP15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 IGKV2D-40P01614 121 aaPredicted RBP15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 BMI1P35226 326 aa15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 SRSF1Q07955 248 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 KLRB1Q12918 225 aa15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 ZNF479Q96JC4 524 aa15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 DPM2O94777 84 aa15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 PRR25Q96S07 402 aa15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 MSRB1Q9NZV6 116 aa15.1■□□□□ 0.01
SNAPC3-206ENST00000490969 IGHV1-3A0A0C4DH29 117 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 H3BMG7 143 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 DLX1P56177 255 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 KLF17Q5JT82 389 aaPredicted RBP15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 CCDC144NLQ6NUI1 221 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 SH2D6Q7Z4S9 175 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 SPAG8Q99932 426 aaPredicted RBP15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 NXT2Q9NPJ8 142 aaKnown RBP15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 DCHS2Q6V1P9 2916 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 HLA-DRB4P13762 266 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 GRNP28799 593 aaKnown RBP15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 ETDBQ3ZM63 59 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 ARPC1AQ92747 370 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 HLA-DRB4X5D2U9 266 aa15.09■□□□□ 0.01
SNAPC3-206ENST00000490969 COL12A1Q99715 3063 aa15.08■□□□□ 0.01
SNAPC3-206ENST00000490969 TMEM8BA6NDV4 472 aa15.08■□□□□ 0.01
SNAPC3-206ENST00000490969 NPIPB5A8MRT5 1133 aa15.08■□□□□ 0.01
SNAPC3-206ENST00000490969 TNFRSF6BO95407 300 aa15.08■□□□□ 0.01
SNAPC3-206ENST00000490969 ZNF80P51504 273 aaPredicted RBP15.08■□□□□ 0.01
SNAPC3-206ENST00000490969 PRB3Q04118 309 aaPredicted RBP15.08■□□□□ 0.01
SNAPC3-206ENST00000490969 S100A7AQ86SG5 101 aa15.08■□□□□ 0.01
SNAPC3-206ENST00000490969 ADIPOQQ15848 244 aa15.08■□□□□ 0
SNAPC3-206ENST00000490969 LINC01559Q495D7 138 aa15.08■□□□□ 0
SNAPC3-206ENST00000490969 VKORC1Q9BQB6 163 aa15.08■□□□□ 0
SNAPC3-206ENST00000490969 CFAP46Q8IYW2 2715 aa15.07■□□□□ 0
SNAPC3-206ENST00000490969 ATP5LO75964 103 aa15.07■□□□□ 0
SNAPC3-206ENST00000490969 Q8TAT8 98 aa15.07■□□□□ 0
SNAPC3-206ENST00000490969 CLUHP3Q96NS8 147 aa15.07■□□□□ 0
SNAPC3-206ENST00000490969 PRORYQ9H606 182 aa15.07■□□□□ 0
SNAPC3-206ENST00000490969 C12orf74Q32Q52 190 aa15.07■□□□□ 0
SNAPC3-206ENST00000490969 ZNF575Q86XF7 245 aa15.07■□□□□ 0
SNAPC3-206ENST00000490969 TMEM158Q8WZ71 300 aa15.07■□□□□ 0
SNAPC3-206ENST00000490969 ANKHD1Q8IWZ3 2542 aaKnown RBP15.07■□□□□ 0
SNAPC3-206ENST00000490969 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.06■□□□□ 0
SNAPC3-206ENST00000490969 BSPH1Q075Z2 132 aa15.06■□□□□ 0
SNAPC3-206ENST00000490969 CNIH1O95406 144 aa15.06■□□□□ 0
SNAPC3-206ENST00000490969 IGLV1-47P01700 117 aa15.06■□□□□ 0
SNAPC3-206ENST00000490969 MAPKAPK5-AS1Q8N8E1 139 aa15.06■□□□□ 0
SNAPC3-206ENST00000490969 TMEM160Q9NX00 188 aa15.06■□□□□ 0
SNAPC3-206ENST00000490969 TAL2Q16559 108 aa15.05■□□□□ 0
SNAPC3-206ENST00000490969 AMTNQ6UX39 209 aa15.05■□□□□ 0
SNAPC3-206ENST00000490969 S4R3C0 116 aa15.05■□□□□ 0
SNAPC3-206ENST00000490969 TRAV40A0A0B4J280 105 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms