RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SLC25A16P16260 332 aa11.53□□□□□ -0.56
COL9A1-208ENST00000489611 TDRG1Q3Y452 100 aa11.53□□□□□ -0.56
COL9A1-208ENST00000489611 SPATA45Q537H7 98 aa11.53□□□□□ -0.56
COL9A1-208ENST00000489611 LYZL1Q6UWQ5 148 aa11.53□□□□□ -0.56
COL9A1-208ENST00000489611 ZNF705AQ6ZN79 300 aaPredicted RBP11.53□□□□□ -0.56
COL9A1-208ENST00000489611 UQCR10Q9UDW1 63 aa11.53□□□□□ -0.56
COL9A1-208ENST00000489611 HSPB8Q9UJY1 196 aa11.53□□□□□ -0.56
COL9A1-208ENST00000489611 ASH1LQ9NR48 2969 aaKnown RBP11.53□□□□□ -0.56
COL9A1-208ENST00000489611 VPS13CQ709C8 3753 aa11.53□□□□□ -0.56
COL9A1-208ENST00000489611 IGHV1-24A0A0C4DH33 117 aa11.52□□□□□ -0.56
COL9A1-208ENST00000489611 A6NDX4 124 aa11.52□□□□□ -0.56
COL9A1-208ENST00000489611 NDUFA4O00483 81 aa11.52□□□□□ -0.56
COL9A1-208ENST00000489611 FER1L6-AS1Q8NA97 138 aa11.52□□□□□ -0.56
COL9A1-208ENST00000489611 VGLL1Q99990 258 aa11.52□□□□□ -0.56
COL9A1-208ENST00000489611 CNFNQ9BYD5 112 aa11.52□□□□□ -0.56
COL9A1-208ENST00000489611 LENEPQ9Y5L5 61 aa11.52□□□□□ -0.56
COL9A1-208ENST00000489611 IGHV3-35A0A0C4DH35 117 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 IGLC6P0CF74 106 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 ARL3P36405 182 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 SSTP61278 116 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 HIST1H1AQ02539 215 aaPredicted RBP11.52□□□□□ -0.57
COL9A1-208ENST00000489611 FAM104BQ5XKR9 115 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 EBLN2Q6P2I7 272 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 BRD3OSQ6XYD6 125 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 TPPP3Q9BW30 176 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 AP5S1Q9NUS5 200 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 U3KQK5 164 aa11.52□□□□□ -0.57
COL9A1-208ENST00000489611 TRAV9-2A0A087WT02 112 aa11.51□□□□□ -0.57
COL9A1-208ENST00000489611 A0A0G2JLM5 398 aa11.51□□□□□ -0.57
COL9A1-208ENST00000489611 LINC01559Q495D7 138 aa11.51□□□□□ -0.57
COL9A1-208ENST00000489611 TMEM78Q5T7P6 136 aa11.51□□□□□ -0.57
COL9A1-208ENST00000489611 C9orf139Q6ZV77 190 aa11.51□□□□□ -0.57
COL9A1-208ENST00000489611 Q71RC1 249 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-208ENST00000489611 DOPEY2Q9Y3R5 2298 aa11.51□□□□□ -0.57
COL9A1-208ENST00000489611 MED13LQ71F56 2210 aa11.51□□□□□ -0.57
COL9A1-208ENST00000489611 CELSR2Q9HCU4 2923 aa11.51□□□□□ -0.57
COL9A1-208ENST00000489611 PPIFP30405 207 aaKnown RBP11.5□□□□□ -0.57
COL9A1-208ENST00000489611 C9orf47Q6ZRZ4 202 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 ORMDL3Q8N138 153 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 SNHG12Q9BXW3 62 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 MAP1LC3CQ9BXW4 147 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 PPBPP02775 128 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 ZNF138P52744 262 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 PET117Q6UWS5 81 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 C8orf86Q6ZUL3 223 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 LINC00469Q8N7U9 141 aa11.5□□□□□ -0.57
COL9A1-208ENST00000489611 ABCA2Q9BZC7 2435 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 IGHV3OR16-10A0A075B7F0 116 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 SYS1-DBNDD2H3BUS1 97 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 H3BUX3 64 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 IGLC3P0DOY3 106 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 FA2HQ7L5A8 372 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 Q8TAT8 98 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 TMEM191AQ9H0A3 160 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 LAMTOR2Q9Y2Q5 125 aa11.49□□□□□ -0.57
COL9A1-208ENST00000489611 IGHV3OR16-8A0A075B7F1 116 aa11.48□□□□□ -0.57
COL9A1-208ENST00000489611 J3QLI3 93 aa11.48□□□□□ -0.57
COL9A1-208ENST00000489611 ORM1P02763 201 aa11.48□□□□□ -0.57
COL9A1-208ENST00000489611 OR10AG1Q8NH19 301 aa11.48□□□□□ -0.57
COL9A1-208ENST00000489611 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
COL9A1-208ENST00000489611 A0A1B0GV90 55 aa11.48□□□□□ -0.57
COL9A1-208ENST00000489611 HLA-DMBP28068 263 aa11.48□□□□□ -0.57
COL9A1-208ENST00000489611 ZNF80P51504 273 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-208ENST00000489611 DEFB113Q30KQ7 82 aa11.48□□□□□ -0.57
COL9A1-208ENST00000489611 SPATA12Q7Z6I5 190 aa11.48□□□□□ -0.57
COL9A1-208ENST00000489611 TMSB15BA0A087X1C1 80 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 EREGO14944 169 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 NUTF2P61970 127 aaKnown RBP11.47□□□□□ -0.57
COL9A1-208ENST00000489611 TWIST1Q15672 202 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 SAMD13Q5VXD3 122 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 PRELID3AQ96N28 172 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 NBPF19A0A087WUL8 3843 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 TRAV8-2A0A0B4J237 113 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 C16orf92Q96LL3 132 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 ST20Q9HBF5 79 aa11.47□□□□□ -0.57
COL9A1-208ENST00000489611 PTPN13Q12923 2485 aa11.46□□□□□ -0.57
COL9A1-208ENST00000489611 IGLV1-40P01703 118 aa11.46□□□□□ -0.58
COL9A1-208ENST00000489611 RNF182Q8N6D2 247 aa11.46□□□□□ -0.58
COL9A1-208ENST00000489611 LINC01356Q8N9X3 169 aa11.46□□□□□ -0.58
COL9A1-208ENST00000489611 LINC00477Q96M19 166 aa11.46□□□□□ -0.58
COL9A1-208ENST00000489611 NPFFR1Q9GZQ6 430 aa11.46□□□□□ -0.58
COL9A1-208ENST00000489611 BEX4Q9NWD9 120 aaPredicted RBP11.46□□□□□ -0.58
COL9A1-208ENST00000489611 SVEP1Q4LDE5 3571 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 HELZ2Q9BYK8 2649 aaKnown RBP11.45□□□□□ -0.58
COL9A1-208ENST00000489611 POLQO75417 2590 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 TMEM213A2RRL7 107 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 TMEM89A2RUT3 159 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 OR4C46A6NHA9 309 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 PRAC2D3DTV9 90 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 D6R8Y8 96 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 OVOL1O14753 267 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 ERCC8Q13216 396 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 MRPS16Q9Y3D3 137 aaKnown RBP11.45□□□□□ -0.58
COL9A1-208ENST00000489611 TRBV7-9A0A0J9YWB2 115 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 HSBP1L1C9JCN9 74 aa11.45□□□□□ -0.58
COL9A1-208ENST00000489611 M0QZ24 198 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms