RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TEX13DA0A0J9YY54 714 aaPredicted RBP7.26□□□□□ -1.25
HDAC6-233ENST00000489352 H7C1H1 209 aa7.26□□□□□ -1.25
HDAC6-233ENST00000489352 OR4E1P0C645 316 aa7.26□□□□□ -1.25
HDAC6-233ENST00000489352 GATA1P15976 413 aaPredicted RBP7.26□□□□□ -1.25
HDAC6-233ENST00000489352 AQP4P55087 323 aa7.26□□□□□ -1.25
HDAC6-233ENST00000489352 PRR3P79522 188 aaKnown RBP7.26□□□□□ -1.25
HDAC6-233ENST00000489352 RPL19P84098 196 aaKnown RBP7.26□□□□□ -1.25
HDAC6-233ENST00000489352 ERCC8Q13216 396 aa7.26□□□□□ -1.25
HDAC6-233ENST00000489352 TMEM268Q5VZI3 342 aa7.26□□□□□ -1.25
HDAC6-233ENST00000489352 BPIFA4PQ86YQ2 179 aa7.26□□□□□ -1.25
HDAC6-233ENST00000489352 SELENOHQ8IZQ5 122 aaKnown RBP7.26□□□□□ -1.25
HDAC6-233ENST00000489352 LINC00477Q96M19 166 aa7.26□□□□□ -1.25
HDAC6-233ENST00000489352 TXNL4BQ9NX01 149 aaKnown RBP7.26□□□□□ -1.25
HDAC6-233ENST00000489352 H3BTX0 84 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 LINC00869P0C866 280 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 ELOBQ15370 118 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 RHOHQ15669 191 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 KCNIP4Q6PIL6 250 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 Q6ZQT7 251 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 SLC25A29Q8N8R3 303 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 OR52I2Q8NH67 350 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 DNAJC30Q96LL9 226 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 C1orf43Q9BWL3 253 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 SRRQ9GZT4 340 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 HSPB7Q9UBY9 170 aa7.25□□□□□ -1.25
HDAC6-233ENST00000489352 FBLL1A6NHQ2 334 aaKnown RBP7.24□□□□□ -1.25
HDAC6-233ENST00000489352 USP17L23D6RBM5 183 aa7.24□□□□□ -1.25
HDAC6-233ENST00000489352 AKR1C4P17516 323 aa7.24□□□□□ -1.25
HDAC6-233ENST00000489352 SDC2P34741 201 aa7.24□□□□□ -1.25
HDAC6-233ENST00000489352 RPP30P78346 268 aaKnown RBP7.24□□□□□ -1.25
HDAC6-233ENST00000489352 Q0VG73 95 aa7.24□□□□□ -1.25
HDAC6-233ENST00000489352 CYP2G1PQ6ZSU1 146 aa7.24□□□□□ -1.25
HDAC6-233ENST00000489352 PRSS48Q7RTY5 328 aa7.24□□□□□ -1.25
HDAC6-233ENST00000489352 GLYATL2Q8WU03 294 aa7.24□□□□□ -1.25
HDAC6-233ENST00000489352 ARL6Q9H0F7 186 aa7.24□□□□□ -1.25
HDAC6-233ENST00000489352 SMCO3A2RU48 225 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 SLC17A3O00476 420 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 PRSS1P07477 247 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 CCR6P51684 374 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 POLR2GP62487 172 aaKnown RBP eCLIP7.23□□□□□ -1.25
HDAC6-233ENST00000489352 CIRBPQ14011 172 aaKnown RBP7.23□□□□□ -1.25
HDAC6-233ENST00000489352 SMCO1Q147U7 214 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 MUC21Q5SSG8 566 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 OR10G9Q8NGN4 311 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 LHFPL5Q8TAF8 219 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 GPX8Q8TED1 209 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 ARV1Q9H2C2 271 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 DUSP21Q9H596 190 aa7.23□□□□□ -1.25
HDAC6-233ENST00000489352 A0A087WWC5 75 aa7.22□□□□□ -1.25
HDAC6-233ENST00000489352 A0A087WX48 190 aa7.22□□□□□ -1.25
HDAC6-233ENST00000489352 PGPA6NDG6 321 aa7.22□□□□□ -1.25
HDAC6-233ENST00000489352 MRPS12O15235 138 aaKnown RBP7.22□□□□□ -1.25
HDAC6-233ENST00000489352 HLA-DQA1P01909 254 aa7.22□□□□□ -1.25
HDAC6-233ENST00000489352 NMBP08949 121 aa7.22□□□□□ -1.25
HDAC6-233ENST00000489352 SELENOTP62341 195 aa7.22□□□□□ -1.25
HDAC6-233ENST00000489352 UBE2NLQ5JXB2 153 aa7.22□□□□□ -1.25
HDAC6-233ENST00000489352 YIPF6Q96EC8 236 aa7.22□□□□□ -1.25
HDAC6-233ENST00000489352 C14orf166Q9Y224 244 aaKnown RBP7.22□□□□□ -1.25
HDAC6-233ENST00000489352 TRGV11A0A075B6L2 103 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 IGHV3-64A0A075B6Q5 118 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 TRBV6-4A0A1B0GX49 114 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 M0R2P5 195 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 IAPPP10997 89 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 PLP1P60201 277 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 BAK1Q16611 211 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 TMEM183BQ1AE95 376 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 RNASE10Q5GAN6 216 aaKnown RBP7.21□□□□□ -1.26
HDAC6-233ENST00000489352 TMEM78Q5T7P6 136 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 LINC00305Q7Z4B0 112 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 NIT1Q86X76 327 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 TMEM183AQ8IXX5 376 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 OR13C8Q8NGS7 320 aa7.21□□□□□ -1.26
HDAC6-233ENST00000489352 SMIM31A0A1B0GVY4 71 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 C5orf51A6NDU8 294 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 CRPP02741 224 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 CHTF8P0CG12 524 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 CRISP2P16562 243 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 GUK1Q16774 197 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 SCGB2B2Q4G0G5 96 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 FAM159AQ6UWV7 190 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 ZNF664Q8N3J9 261 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 FAM19A4Q96LR4 140 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 CNBD2Q96M20 576 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 AGPAT4-IT1Q9H0P7 198 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 NAA60Q9H7X0 242 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 SLC39A9Q9NUM3 307 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
HDAC6-233ENST00000489352 CIDEAO60543 219 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 SMIM18P0DKX4 95 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 UBE2MP61081 183 aaKnown RBP7.19□□□□□ -1.26
HDAC6-233ENST00000489352 CACNG7P62955 275 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 C4orf46Q504U0 113 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 ATRAIDQ6UW56 229 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 LHFPL1Q86WI0 220 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 TERB2Q8NHR7 220 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 Q8TAT8 98 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 MARCH1Q8TCQ1 289 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 SPACA4Q8TDM5 124 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 PSORS1C2Q9UIG4 136 aa7.19□□□□□ -1.26
HDAC6-233ENST00000489352 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms