RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 CBLN1P23435 193 aa13.64□□□□□ -0.23
CD40-206ENST00000489304 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
CD40-206ENST00000489304 C20orf173Q96LM9 149 aa13.64□□□□□ -0.23
CD40-206ENST00000489304 SMIM27A0A1W2PRY6 76 aa13.64□□□□□ -0.23
CD40-206ENST00000489304 SAMD13Q5VXD3 122 aa13.64□□□□□ -0.23
CD40-206ENST00000489304 GBGT1Q8N5D6 347 aa13.64□□□□□ -0.23
CD40-206ENST00000489304 PRR25Q96S07 402 aa13.64□□□□□ -0.23
CD40-206ENST00000489304 SRD5A3Q9H8P0 318 aa13.64□□□□□ -0.23
CD40-206ENST00000489304 SETD2Q9BYW2 2564 aaPredicted RBP13.64□□□□□ -0.23
CD40-206ENST00000489304 RAX2Q96IS3 184 aa13.63□□□□□ -0.23
CD40-206ENST00000489304 ASCL2Q99929 193 aa13.63□□□□□ -0.23
CD40-206ENST00000489304 TSSC4Q9Y5U2 329 aaPredicted RBP13.63□□□□□ -0.23
CD40-206ENST00000489304 NPIPB6E9PJ23 425 aa13.62□□□□□ -0.23
CD40-206ENST00000489304 RAB5BP61020 215 aa13.62□□□□□ -0.23
CD40-206ENST00000489304 CT83Q5H943 113 aa13.62□□□□□ -0.23
CD40-206ENST00000489304 C9orf47Q6ZRZ4 202 aa13.62□□□□□ -0.23
CD40-206ENST00000489304 DAZAP1Q96EP5 407 aaKnown RBP13.62□□□□□ -0.23
CD40-206ENST00000489304 C8orf49Q96NF6 230 aa13.62□□□□□ -0.23
CD40-206ENST00000489304 RPP21Q9H633 154 aaKnown RBP13.62□□□□□ -0.23
CD40-206ENST00000489304 P01737 135 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 ERCC8Q13216 396 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 ADAMTSL5Q6ZMM2 481 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 OR4B1Q8NGF8 309 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 DCANP1Q8TF63 244 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 AGPAT4-IT1Q9H0P7 198 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 PPP1R14DQ9NXH3 145 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 PEMTQ9UBM1 199 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 ADARB2-AS1A8MUL3 147 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 M0QZ24 198 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 OVOL1O14753 267 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 FHL3Q13643 280 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 ZNF738Q8NE65 137 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 Q8TAT8 98 aa13.61□□□□□ -0.23
CD40-206ENST00000489304 DLX4Q92988 240 aaPredicted RBP13.61□□□□□ -0.23
CD40-206ENST00000489304 IGKV3-7A0A075B6H7 116 aa13.6□□□□□ -0.23
CD40-206ENST00000489304 CA1P00915 261 aaPredicted RBP13.6□□□□□ -0.23
CD40-206ENST00000489304 CT45A10P0DMU9 189 aa13.6□□□□□ -0.23
CD40-206ENST00000489304 ID1P41134 155 aa13.6□□□□□ -0.23
CD40-206ENST00000489304 CRIP1P50238 77 aa13.6□□□□□ -0.23
CD40-206ENST00000489304 OR9G4Q8NGQ1 327 aa13.6□□□□□ -0.23
CD40-206ENST00000489304 TSKUQ8WUA8 353 aa13.6□□□□□ -0.23
CD40-206ENST00000489304 NDFIP1Q9BT67 221 aa13.6□□□□□ -0.23
CD40-206ENST00000489304 ZNF138P52744 262 aa13.59□□□□□ -0.23
CD40-206ENST00000489304 TMEM78Q5T7P6 136 aa13.59□□□□□ -0.23
CD40-206ENST00000489304 GPR61Q9BZJ8 451 aa13.59□□□□□ -0.23
CD40-206ENST00000489304 MS4A6AQ9H2W1 248 aa13.59□□□□□ -0.23
CD40-206ENST00000489304 A8MWL6 223 aa13.59□□□□□ -0.23
CD40-206ENST00000489304 TRGC2P03986 189 aa13.59□□□□□ -0.23
CD40-206ENST00000489304 NSUN5P1Q3KNT7 163 aa13.59□□□□□ -0.23
CD40-206ENST00000489304 ZFP82Q8N141 532 aa13.59□□□□□ -0.23
CD40-206ENST00000489304 IZUMO1RA6ND01 250 aa13.58□□□□□ -0.24
CD40-206ENST00000489304 K7EQG2 157 aa13.58□□□□□ -0.24
CD40-206ENST00000489304 CCL24O00175 119 aa13.58□□□□□ -0.24
CD40-206ENST00000489304 TCL1AP56279 114 aa13.58□□□□□ -0.24
CD40-206ENST00000489304 SMUG1Q53HV7 270 aa13.58□□□□□ -0.24
CD40-206ENST00000489304 PHOX2AO14813 284 aa13.57□□□□□ -0.24
CD40-206ENST00000489304 CSN3P07498 182 aa13.57□□□□□ -0.24
CD40-206ENST00000489304 RPL19P84098 196 aaKnown RBP13.57□□□□□ -0.24
CD40-206ENST00000489304 FAM162BQ5T6X4 162 aa13.57□□□□□ -0.24
CD40-206ENST00000489304 OR10J6PQ8NGY7 276 aa13.57□□□□□ -0.24
CD40-206ENST00000489304 LINC00477Q96M19 166 aa13.57□□□□□ -0.24
CD40-206ENST00000489304 GFRA4Q9GZZ7 299 aa13.57□□□□□ -0.24
CD40-206ENST00000489304 NAT8BQ9UHF3 227 aa13.57□□□□□ -0.24
CD40-206ENST00000489304 LENEPQ9Y5L5 61 aa13.57□□□□□ -0.24
CD40-206ENST00000489304 LOC105371267A0A1B0GV96 52 aa13.56□□□□□ -0.24
CD40-206ENST00000489304 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
CD40-206ENST00000489304 OR2D3Q8NGH3 330 aa13.56□□□□□ -0.24
CD40-206ENST00000489304 NEU1Q99519 415 aa13.56□□□□□ -0.24
CD40-206ENST00000489304 SH2D1AO60880 128 aa13.56□□□□□ -0.24
CD40-206ENST00000489304 WFDC3Q8IUB2 231 aa13.56□□□□□ -0.24
CD40-206ENST00000489304 NUP35Q8NFH5 326 aa13.56□□□□□ -0.24
CD40-206ENST00000489304 C2CD3Q4AC94 2353 aa13.55□□□□□ -0.24
CD40-206ENST00000489304 ZNF80P51504 273 aaPredicted RBP13.55□□□□□ -0.24
CD40-206ENST00000489304 OR8A1Q8NGG7 326 aa13.55□□□□□ -0.24
CD40-206ENST00000489304 HIGD1CA8MV81 97 aa13.54□□□□□ -0.24
CD40-206ENST00000489304 ZNF705DP0CH99 300 aaPredicted RBP13.54□□□□□ -0.24
CD40-206ENST00000489304 ZNF705BP0CI00 300 aaPredicted RBP13.54□□□□□ -0.24
CD40-206ENST00000489304 ACTL10Q5JWF8 245 aa13.54□□□□□ -0.24
CD40-206ENST00000489304 GTSF1Q8WW33 167 aa13.54□□□□□ -0.24
CD40-206ENST00000489304 A0A1B0GUS0 222 aa13.53□□□□□ -0.24
CD40-206ENST00000489304 TFPI2P48307 235 aa13.53□□□□□ -0.24
CD40-206ENST00000489304 PAFAH1B2P68402 229 aa13.53□□□□□ -0.24
CD40-206ENST00000489304 COX19Q49B96 90 aa13.53□□□□□ -0.24
CD40-206ENST00000489304 FRZBQ92765 325 aa13.53□□□□□ -0.24
CD40-206ENST00000489304 TRAV2A0A0B4J234 112 aa13.53□□□□□ -0.24
CD40-206ENST00000489304 FABP5P3A8MUU1 101 aa13.53□□□□□ -0.24
CD40-206ENST00000489304 FOXA3P55318 350 aaPredicted RBP13.53□□□□□ -0.24
CD40-206ENST00000489304 DEFB1P60022 68 aa13.53□□□□□ -0.24
CD40-206ENST00000489304 SNRPD3P62318 126 aaKnown RBP13.53□□□□□ -0.24
CD40-206ENST00000489304 WNK1Q9H4A3 2382 aa13.52□□□□□ -0.24
CD40-206ENST00000489304 TRBV7-9A0A0J9YWB2 115 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 SPINK4O60575 86 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H2BKO60814 126 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H2BJP06899 126 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H2BOP23527 126 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H2BBP33778 126 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H2BDP58876 126 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H2BCP62807 126 aa13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST1H1AQ02539 215 aaPredicted RBP13.52□□□□□ -0.25
CD40-206ENST00000489304 HIST2H2BEQ16778 126 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms