RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 RBMY1CP0DJD4 496 aa6.4□□□□□ -1.38
SMKR1-202ENST00000488846 PRB4P10163 310 aaPredicted RBP6.4□□□□□ -1.38
SMKR1-202ENST00000488846 CRISP2P16562 243 aa6.4□□□□□ -1.38
SMKR1-202ENST00000488846 CDKN1BP46527 198 aa6.4□□□□□ -1.38
SMKR1-202ENST00000488846 FHITP49789 147 aa6.4□□□□□ -1.38
SMKR1-202ENST00000488846 FXYD7P58549 80 aa6.4□□□□□ -1.38
SMKR1-202ENST00000488846 RBMY1FQ15415 496 aaKnown RBP6.4□□□□□ -1.38
SMKR1-202ENST00000488846 MUC7Q8TAX7 377 aa6.4□□□□□ -1.38
SMKR1-202ENST00000488846 TMED6Q8WW62 240 aa6.4□□□□□ -1.38
SMKR1-202ENST00000488846 IGKV2-40A0A087WW87 121 aaPredicted RBP6.39□□□□□ -1.39
SMKR1-202ENST00000488846 IGHV4-28A0A0C4DH34 117 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 MAP1LC3B2A6NCE7 125 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 PGPA6NDG6 321 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 KLLNB2CW77 178 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 IGKV2D-40P01614 121 aaPredicted RBP6.39□□□□□ -1.39
SMKR1-202ENST00000488846 TSPOP30536 169 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 LEPP41159 167 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 CSN1S1P47710 185 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 SMCPP49901 116 aaPredicted RBP6.39□□□□□ -1.39
SMKR1-202ENST00000488846 RAB5CP51148 216 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 ERCC8Q13216 396 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 KIR3DS1Q14943 382 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 FAM74A1Q5RGS3 127 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 EIF5AL1Q6IS14 154 aaKnown RBP6.39□□□□□ -1.39
SMKR1-202ENST00000488846 TMEM256Q8N2U0 113 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 VGLL1Q99990 258 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 MAP1LC3BQ9GZQ8 125 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 ZNF492Q9P255 531 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 GOLT1BQ9Y3E0 138 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 LENEPQ9Y5L5 61 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 ARL2-SNX15V9GYD0 113 aa6.39□□□□□ -1.39
SMKR1-202ENST00000488846 STARD9Q9P2P6 4700 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 TRAV12-2A0A075B6T6 113 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 TRAV1-1A0A0B4J248 108 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 SERTM2A0A1B0GWG4 89 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 GGTLC3B5MD39 225 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 C3orf84H3BNL1 204 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 ZNF324O75467 553 aaPredicted RBP6.38□□□□□ -1.39
SMKR1-202ENST00000488846 INSP01308 110 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 SULT1A2P50226 295 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 TMEM78Q5T7P6 136 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 GFI1BQ5VTD9 330 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 CCDC28AQ8IWP9 274 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 ZFAND2AQ8N6M9 145 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 C5orf17Q8NAS9 161 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 IL17DQ8TAD2 202 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 NKX6-2Q9C056 277 aaPredicted RBP6.38□□□□□ -1.39
SMKR1-202ENST00000488846 TMPRSS5Q9H3S3 457 aa6.38□□□□□ -1.39
SMKR1-202ENST00000488846 TMEM189A5PLL7 270 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 FAM74A7A6NL05 159 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 H7BYZ3 331 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 TCRAP04437 139 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 ZNF138P52744 262 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 FGF8P55075 233 aaPredicted RBP6.37□□□□□ -1.39
SMKR1-202ENST00000488846 TAS2R60P59551 318 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
SMKR1-202ENST00000488846 PMS2P11Q13670 270 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 CMTM2Q8TAZ6 248 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 FAM213BQ8TBF2 198 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 LINC00467Q9BRT7 94 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 EPDR1Q9UM22 224 aa6.37□□□□□ -1.39
SMKR1-202ENST00000488846 YTHDF2Q9Y5A9 579 aaKnown RBP6.37□□□□□ -1.39
SMKR1-202ENST00000488846 PLAC8L1A1L4L8 177 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 C7orf71A4D174 169 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 FBLL1A6NHQ2 334 aaKnown RBP6.36□□□□□ -1.39
SMKR1-202ENST00000488846 IGLV2-11P01706 119 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 HBE1P02100 147 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 H2AFB1P0C5Y9 115 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 GNG5P63218 68 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 CASC10Q5T4H9 136 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 PRR9Q5T870 116 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 SFT2D1Q8WV19 159 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 TCEAL7Q9BRU2 100 aa6.36□□□□□ -1.39
SMKR1-202ENST00000488846 IGHV3OR16-12A0A075B7B8 117 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 DEFB4AO15263 64 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 PPT1P50897 306 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 NKX2-5P52952 324 aaPredicted RBP6.35□□□□□ -1.39
SMKR1-202ENST00000488846 RRN3P1Q2M238 152 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 Q6AWC8 147 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 ZNF493Q6ZR52 646 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 GOLT1AQ6ZVE7 132 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 IQCF2Q8IXL9 164 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 CYB561D1Q8N8Q1 229 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 TMEM75Q8N9X5 138 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 Q8TAT8 98 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 RNASE8Q8TDE3 154 aaKnown RBP6.35□□□□□ -1.39
SMKR1-202ENST00000488846 HIST1H2BAQ96A08 127 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 TVP23CQ96ET8 276 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 PYGO2Q9BRQ0 406 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 ATG101Q9BSB4 218 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 PGPEP1Q9NXJ5 209 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 KLF12Q9Y4X4 402 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
SMKR1-202ENST00000488846 PLECQ15149 4684 aaKnown RBP6.34□□□□□ -1.39
SMKR1-202ENST00000488846 TRAV8-1A0A0A6YYK1 113 aa6.34□□□□□ -1.39
SMKR1-202ENST00000488846 TRAV12-3A0A0B4J271 114 aa6.34□□□□□ -1.39
SMKR1-202ENST00000488846 LOC102723971A0A1B0GUV8 181 aa6.34□□□□□ -1.39
SMKR1-202ENST00000488846 ZNF705GA8MUZ8 300 aaPredicted RBP6.34□□□□□ -1.39
SMKR1-202ENST00000488846 PRM2P04554 102 aa6.34□□□□□ -1.39
SMKR1-202ENST00000488846 GPX1P07203 203 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms