RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 KLF12Q9Y4X4 402 aa4.38□□□□□ -1.71
PTCH1-211ENST00000488809 IGHV1OR15-1A0A075B7D0 117 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 TRAV8-6A0A0B4J262 113 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 IGHV3-38A0A0C4DH36 116 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 LINC00854A0A1B0GVQ3 168 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 LRCOL1A6NCL2 159 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 H3BTX0 84 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 AGPAT2O15120 278 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 SSSCA1O60232 199 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 SFT2D2O95562 160 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 OR4E1P0C645 316 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 METTL15P1P0C7V9 234 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 HIST1H1EP10412 219 aaKnown RBP4.37□□□□□ -1.71
PTCH1-211ENST00000488809 GYPEP15421 78 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 RNASE4P34096 147 aaKnown RBP4.37□□□□□ -1.71
PTCH1-211ENST00000488809 PPT1P50897 306 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 BTN1A1Q13410 526 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 ASAH1Q13510 395 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 OPCMLQ14982 345 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 LINC01556Q5JQF7 62 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 TMEM78Q5T7P6 136 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 IQCF2Q8IXL9 164 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 C12orf45Q8N5I9 185 aaPredicted RBP4.37□□□□□ -1.71
PTCH1-211ENST00000488809 OR1L4Q8NGR5 311 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 SAT2Q96F10 170 aaPredicted RBP4.37□□□□□ -1.71
PTCH1-211ENST00000488809 SMIM8Q96KF7 97 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 PFDN5Q99471 154 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 GGACTQ9BVM4 153 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 TM2D2Q9BX73 214 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 SRRQ9GZT4 340 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 SLC25A31Q9H0C2 315 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 AAMDCQ9H7C9 122 aa4.37□□□□□ -1.71
PTCH1-211ENST00000488809 FABP12A6NFH5 140 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 IBA57-AS1B1ANH7 110 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 CTDSP2O14595 271 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 TSC22D2O75157 780 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 CRISP2P16562 243 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 TNFSF8P32971 234 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 UBE2MP61081 183 aaKnown RBP4.36□□□□□ -1.71
PTCH1-211ENST00000488809 ID3Q02535 119 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 CD300CQ08708 224 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 PPP1R1AQ13522 171 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 PDE6HQ13956 83 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 CTF1Q16619 201 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 MORN5Q5VZ52 161 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 TMEM14EPQ6UXP3 125 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 Q6ZSA8 131 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 TOMM5Q8N4H5 51 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 NHLRC2Q8NBF2 726 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 OR10G4Q8NGN3 311 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 MCFD2Q8NI22 146 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 DEDD2Q8WXF8 326 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 TMEM37Q8WXS4 190 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 SH3BGRL3Q9H299 93 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 Q9HAA7 133 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 DNAJC4Q9NNZ3 241 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 FAM30AQ9NZY2 134 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 TIMM9Q9Y5J7 89 aa4.36□□□□□ -1.71
PTCH1-211ENST00000488809 FAT3Q8TDW7 4589 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 TRGV11A0A075B6L2 103 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 H3BQ15 152 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 RS1O15537 224 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 SCGB1D2O95969 90 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 SFTA3P0C7M3 94 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 CAMLGP49069 296 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 TIRAPP58753 221 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 TAS2R30P59541 319 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 ERCC8Q13216 396 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 LAGE3Q14657 143 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 OR10J3Q5JRS4 329 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 C9orf47Q6ZRZ4 202 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 DYNC2LI1Q8TCX1 351 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 BLNKQ8WV28 456 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 FAM19A4Q96LR4 140 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 SPXQ9BT56 116 aa4.35□□□□□ -1.71
PTCH1-211ENST00000488809 NAA50Q9GZZ1 169 aaKnown RBP4.35□□□□□ -1.71
PTCH1-211ENST00000488809 TRBV19A0A075B6N1 114 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 TRAV4A0A0B4J268 109 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 TRBV7-9A0A0J9YWB2 115 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 L7N2F9 121 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 M0R3E3 92 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 CCNKO75909 580 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 PFN1P07737 140 aaKnown RBP4.34□□□□□ -1.71
PTCH1-211ENST00000488809 VAMP2P63027 116 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 ZNF846Q147U1 533 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 ACOT6Q3I5F7 207 aaPredicted RBP4.34□□□□□ -1.71
PTCH1-211ENST00000488809 TOR2AQ5JU69 321 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 FAM159AQ6UWV7 190 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 OR4C5Q8NGB2 326 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 RASL10AQ92737 203 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 ZNF479Q96JC4 524 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 MGST2Q99735 147 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 AGPAT4-IT1Q9H0P7 198 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 SLC39A9Q9NUM3 307 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 TMEM14CQ9P0S9 112 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 TP53TG3Q9ULZ0 132 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 COX11Q9Y6N1 276 aa4.34□□□□□ -1.71
PTCH1-211ENST00000488809 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.72
PTCH1-211ENST00000488809 TRAV8-3A0A0A6YYJ7 113 aa4.33□□□□□ -1.72
PTCH1-211ENST00000488809 C9orf170A2RU37 121 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms