RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TRBV6-1A0A0K0K1D8 114 aa14.71□□□□□ -0.05
CCM2-216ENST00000488727 SNURFLB1AK76 121 aa14.71□□□□□ -0.05
CCM2-216ENST00000488727 OVOL1O14753 267 aa14.71□□□□□ -0.05
CCM2-216ENST00000488727 JOSD1Q15040 202 aaPredicted RBP14.71□□□□□ -0.05
CCM2-216ENST00000488727 BPIFA4PQ86YQ2 179 aa14.71□□□□□ -0.05
CCM2-216ENST00000488727 GPHB5Q86YW7 130 aa14.71□□□□□ -0.05
CCM2-216ENST00000488727 LTAP01374 205 aa14.7□□□□□ -0.06
CCM2-216ENST00000488727 SNRPCP09234 159 aaKnown RBP14.7□□□□□ -0.06
CCM2-216ENST00000488727 RASL11AQ6T310 242 aa14.7□□□□□ -0.06
CCM2-216ENST00000488727 UNQ9165/PRO28630Q6UXU0 137 aa14.7□□□□□ -0.06
CCM2-216ENST00000488727 TMEM136Q6ZRR5 245 aa14.7□□□□□ -0.06
CCM2-216ENST00000488727 NUDT10Q8NFP7 164 aa14.7□□□□□ -0.06
CCM2-216ENST00000488727 NUDT11Q96G61 164 aa14.7□□□□□ -0.06
CCM2-216ENST00000488727 ZNF492Q9P255 531 aa14.7□□□□□ -0.06
CCM2-216ENST00000488727 NOTCH3Q9UM47 2321 aa14.7□□□□□ -0.06
CCM2-216ENST00000488727 IGLC2P0DOY2 106 aa14.69□□□□□ -0.06
CCM2-216ENST00000488727 LYPD1Q8N2G4 141 aa14.69□□□□□ -0.06
CCM2-216ENST00000488727 TRBV19A0A075B6N1 114 aa14.69□□□□□ -0.06
CCM2-216ENST00000488727 MRPS12O15235 138 aaKnown RBP14.69□□□□□ -0.06
CCM2-216ENST00000488727 SCGB2A1O75556 95 aa14.69□□□□□ -0.06
CCM2-216ENST00000488727 IL4P05112 153 aa14.69□□□□□ -0.06
CCM2-216ENST00000488727 ESDP10768 282 aa14.69□□□□□ -0.06
CCM2-216ENST00000488727 CDPF1Q6NVV7 123 aa14.69□□□□□ -0.06
CCM2-216ENST00000488727 HLA-DQA1P01909 254 aa14.68□□□□□ -0.06
CCM2-216ENST00000488727 TCL1AP56279 114 aa14.68□□□□□ -0.06
CCM2-216ENST00000488727 OR9G4Q8NGQ1 327 aa14.68□□□□□ -0.06
CCM2-216ENST00000488727 MGAM2Q2M2H8 2515 aa14.68□□□□□ -0.06
CCM2-216ENST00000488727 IGHV3OR16-8A0A075B7F1 116 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 LGALS9O00182 355 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 NDUFA4O00483 81 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 FRMD6-AS1P0C7T7 363 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 IGLL1P15814 213 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 CRISP2P16562 243 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 RELQ04864 619 aaPredicted RBP14.67□□□□□ -0.06
CCM2-216ENST00000488727 Q0VG73 95 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 FAM106AQ4KMX7 169 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 CT83Q5H943 113 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 REC114Q7Z4M0 266 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 TSKUQ8WUA8 353 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 RPH3ALQ9UNE2 315 aa14.67□□□□□ -0.06
CCM2-216ENST00000488727 LINC00587B1AMM8 73 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 H3BTX0 84 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 EDN2P20800 178 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 CTAG1AP78358 180 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 USF2Q15853 346 aaPredicted RBP14.66□□□□□ -0.06
CCM2-216ENST00000488727 Q86TA4 180 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 NAT8BQ9UHF3 227 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 TP53TG3Q9ULZ0 132 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 C19orf71A6NCJ1 209 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 A8MWP6 167 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 TMEM256Q8N2U0 113 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 CMTM2Q8TAZ6 248 aa14.66□□□□□ -0.06
CCM2-216ENST00000488727 CA1P00915 261 aaPredicted RBP14.65□□□□□ -0.06
CCM2-216ENST00000488727 GZMBP10144 247 aa14.65□□□□□ -0.06
CCM2-216ENST00000488727 PDE6HQ13956 83 aa14.65□□□□□ -0.06
CCM2-216ENST00000488727 TOMM20LQ6UXN7 152 aa14.65□□□□□ -0.06
CCM2-216ENST00000488727 SIGLEC15Q6ZMC9 328 aa14.65□□□□□ -0.06
CCM2-216ENST00000488727 ZFAND3Q9H8U3 227 aa14.65□□□□□ -0.06
CCM2-216ENST00000488727 TMEM213A2RRL7 107 aa14.64□□□□□ -0.07
CCM2-216ENST00000488727 GRIFINA4D1Z8 144 aa14.64□□□□□ -0.07
CCM2-216ENST00000488727 TM4SF20Q53R12 229 aa14.64□□□□□ -0.07
CCM2-216ENST00000488727 OXLD1Q5BKU9 147 aa14.64□□□□□ -0.07
CCM2-216ENST00000488727 PRR27Q6MZM9 219 aa14.64□□□□□ -0.07
CCM2-216ENST00000488727 ADAMTSL5Q6ZMM2 481 aa14.64□□□□□ -0.07
CCM2-216ENST00000488727 TMEM75Q8N9X5 138 aa14.64□□□□□ -0.07
CCM2-216ENST00000488727 RPP21Q9H633 154 aaKnown RBP14.64□□□□□ -0.07
CCM2-216ENST00000488727 IGLV2-11P01706 119 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 CSN3P07498 182 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 LINC00310P59036 64 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 MRPL54Q6P161 138 aaKnown RBP14.63□□□□□ -0.07
CCM2-216ENST00000488727 ATP5L2Q7Z4Y8 100 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 EXOC3-AS1Q8N2X6 119 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 NUP35Q8NFH5 326 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 MCRIP2Q9BUT9 160 aaKnown RBP14.63□□□□□ -0.07
CCM2-216ENST00000488727 ZNF331Q9NQX6 463 aaPredicted RBP14.63□□□□□ -0.07
CCM2-216ENST00000488727 PEMTQ9UBM1 199 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 C2orf70A6NJV1 201 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 NUPR1O60356 82 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 SPINK4O60575 86 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 OR10J3Q5JRS4 329 aa14.63□□□□□ -0.07
CCM2-216ENST00000488727 NPIPB6E9PJ23 425 aa14.62□□□□□ -0.07
CCM2-216ENST00000488727 ZNF207O43670 478 aaKnown RBP14.62□□□□□ -0.07
CCM2-216ENST00000488727 SAP30O75446 220 aa14.62□□□□□ -0.07
CCM2-216ENST00000488727 PAFAH1B2P68402 229 aa14.62□□□□□ -0.07
CCM2-216ENST00000488727 GOLT1AQ6ZVE7 132 aa14.62□□□□□ -0.07
CCM2-216ENST00000488727 SGK494Q96LW2 274 aa14.62□□□□□ -0.07
CCM2-216ENST00000488727 NEU1Q99519 415 aa14.62□□□□□ -0.07
CCM2-216ENST00000488727 DAZ1Q9NQZ3 744 aaKnown RBP14.62□□□□□ -0.07
CCM2-216ENST00000488727 UFC1Q9Y3C8 167 aa14.62□□□□□ -0.07
CCM2-216ENST00000488727 G3V4G9 280 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 S100A7P31151 101 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 LINC00322Q6ZN03 302 aaPredicted RBP14.61□□□□□ -0.07
CCM2-216ENST00000488727 ARL6IP6Q8N6S5 226 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 OR4B1Q8NGF8 309 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 GFRA4Q9GZZ7 299 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 A0A1B0GXF2 115 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 FAM231BA6NCW3 169 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 A8MWL6 223 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 P01737 135 aa14.61□□□□□ -0.07
CCM2-216ENST00000488727 C9orf66Q5T8R8 295 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms