RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RPS3P23396 243 aaKnown RBP eCLIP0.57□□□□□ -2.326e-20■■■□□ 18.1
CD46-215ENST00000488596 OR8B8Q15620 311 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 LINC00305Q7Z4B0 112 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 GKN2Q86XP6 184 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 OR5AS1Q8N127 324 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 TEX29Q8N6K0 151 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 PRELID3AQ96N28 172 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 LXNQ9BS40 222 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 TAF9BQ9HBM6 251 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 CEP152O94986 1710 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 NINQ8N4C6 2090 aa0.57□□□□□ -2.32
CD46-215ENST00000488596 OVOS2A0A0G2JMS6 1433 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 PTPRDP23468 1912 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 TRAV36DV7A0A075B6V5 113 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 A0A087WSZ3 146 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 TRAV13-1A0A0B4J241 112 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 TRBV7-6A0A0J9YX20 115 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 TRBV27A0A0K0K1C4 114 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 A0A1B0GX51 115 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 C9orf170A2RU37 121 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 C5orf67F2Z3F1 127 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 DEGS1O15121 323 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 SCGB1A1P11684 91 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 MAXP61244 160 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 CIRBPQ14011 172 aaKnown RBP0.56□□□□□ -2.32
CD46-215ENST00000488596 ALX1Q15699 326 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 TEN1Q86WV5 123 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 SBSPONQ8IVN8 264 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 OR8I2Q8N0Y5 310 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 TMEM229BQ8NBD8 167 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 PLPP5Q8NEB5 264 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 ZNF431Q8TF32 576 aaPredicted RBP0.56□□□□□ -2.32
CD46-215ENST00000488596 BRK1Q8WUW1 75 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 CLEC2BQ92478 149 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 DIRC1Q969H9 104 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 OR4C12Q96R67 309 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 SPANXA1Q9NS26 97 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 TPRKBQ9Y3C4 175 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 NOTCH1P46531 2555 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 TRPM7Q96QT4 1865 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 ARHGEF10O15013 1369 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 RFX7Q2KHR2 1363 aa0.56□□□□□ -2.32
CD46-215ENST00000488596 FAM135BQ49AJ0 1406 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 F8W1H4 67 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 H3BRM9 83 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 M0QZK8 103 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 NUPR1O60356 82 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 DPM2O94777 84 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 TPT1P13693 172 aaKnown RBP0.55□□□□□ -2.32
CD46-215ENST00000488596 COX7CP15954 63 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 CRYGSP22914 178 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 SRP9P49458 86 aaKnown RBP0.55□□□□□ -2.32
CD46-215ENST00000488596 MRPS36P82909 103 aaKnown RBP0.55□□□□□ -2.32
CD46-215ENST00000488596 CCDC153Q494R4 210 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 KRTAP26-1Q6PEX3 210 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 MORN4Q8NDC4 146 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 OR5A2Q8NGI9 324 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 OR51A4Q8NGJ6 313 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 OR5AK2Q8NH90 309 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 CCL4L1Q8NHW4 92 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 NIT2Q9NQR4 276 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 BATF3Q9NR55 127 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 CBLN4Q9NTU7 201 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 SPANXCQ9NY87 97 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 JPT1Q9UK76 154 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 DSPPQ9NZW4 1301 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 ZDBF2Q9HCK1 2354 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 MED23Q9ULK4 1368 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 SPTBP11277 2137 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 ERBINQ96RT1 1412 aa0.55□□□□□ -2.32
CD46-215ENST00000488596 CDK5RAP2Q96SN8 1893 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 HELZP42694 1942 aaKnown RBP0.54□□□□□ -2.32
CD46-215ENST00000488596 MYH13Q9UKX3 1938 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 BORCS7-ASMTA0A0B4J1R7 106 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 LOC105371267A0A1B0GV96 52 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 LOC107986453A0A1B0GWG9 222 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 TMEM189A5PLL7 270 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 H3BMG7 143 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 ARPC5O15511 151 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 TRACP01848 142 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 SAA1P0DJI8 122 aaPredicted RBP0.54□□□□□ -2.32
CD46-215ENST00000488596 CMPK1P30085 196 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 SDC4P31431 198 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 RPL22P35268 128 aaKnown RBP0.54□□□□□ -2.32
CD46-215ENST00000488596 GTF2A1P52655 376 aaPredicted RBP0.54□□□□□ -2.32
CD46-215ENST00000488596 RPS28P62857 69 aaKnown RBP0.54□□□□□ -2.32
CD46-215ENST00000488596 DIAPH2-AS1Q14236 149 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 HAGHLQ6PII5 290 aaPredicted RBP0.54□□□□□ -2.32
CD46-215ENST00000488596 CASC2Q6XLA1 102 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 ZCCHC23Q6ZST2 131 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 TCTE3Q8IZS6 198 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 TET1Q8NFU7 2136 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 OR10AG1Q8NH19 301 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 NAT14Q8WUY8 206 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 LZICQ8WZA0 190 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 AP1S3Q96PC3 154 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 CST11Q9H112 138 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 TMEM138Q9NPI0 162 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 FKBP11Q9NYL4 201 aa0.54□□□□□ -2.32
CD46-215ENST00000488596 GSKIPQ9P0R6 139 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms