RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 C7orf71A4D174 169 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 PRSS29PA6NIE9 313 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 J3KRW8 73 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 MPC2O95563 127 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 NMBP08949 121 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 NBEAP1P0C6P0 100 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 CRISP2P16562 243 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 ERCC8Q13216 396 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 AGPAT4-IT1Q9H0P7 198 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 FUT9Q9Y231 359 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 HSPB11Q9Y547 144 aa16.18■□□□□ 0.18
CUL4A-209ENST00000488558 DAZ2Q13117 558 aaKnown RBP16.17■□□□□ 0.18
CUL4A-209ENST00000488558 ICAM4Q14773 271 aa16.17■□□□□ 0.18
CUL4A-209ENST00000488558 SOHLH1Q5JUK2 328 aa16.17■□□□□ 0.18
CUL4A-209ENST00000488558 ZNF680Q8NEM1 530 aa16.17■□□□□ 0.18
CUL4A-209ENST00000488558 FXYD5Q96DB9 178 aa16.17■□□□□ 0.18
CUL4A-209ENST00000488558 PAXXQ9BUH6 204 aa16.17■□□□□ 0.18
CUL4A-209ENST00000488558 NUDT3O95989 172 aa16.16■□□□□ 0.18
CUL4A-209ENST00000488558 RNF141Q8WVD5 230 aa16.16■□□□□ 0.18
CUL4A-209ENST00000488558 BATF3Q9NR55 127 aa16.16■□□□□ 0.18
CUL4A-209ENST00000488558 ZNF324O75467 553 aaPredicted RBP16.15■□□□□ 0.18
CUL4A-209ENST00000488558 TMEM78Q5T7P6 136 aa16.15■□□□□ 0.18
CUL4A-209ENST00000488558 ZNF503Q96F45 646 aa16.15■□□□□ 0.18
CUL4A-209ENST00000488558 TRBV7-9A0A0J9YWB2 115 aa16.14■□□□□ 0.17
CUL4A-209ENST00000488558 RPL12P30050 165 aaKnown RBP16.14■□□□□ 0.17
CUL4A-209ENST00000488558 CCL18P55774 89 aa16.14■□□□□ 0.17
CUL4A-209ENST00000488558 ANXA2RQ3ZCQ2 193 aa16.14■□□□□ 0.17
CUL4A-209ENST00000488558 FAM122CQ6P4D5 195 aa16.14■□□□□ 0.17
CUL4A-209ENST00000488558 IGKV2-40A0A087WW87 121 aaPredicted RBP16.13■□□□□ 0.17
CUL4A-209ENST00000488558 GAGE12BA1L429 117 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 H3BNG1 76 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 GAGE7O76087 117 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 IGKV2D-40P01614 121 aaPredicted RBP16.13■□□□□ 0.17
CUL4A-209ENST00000488558 OR10J4P0C629 311 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 GAGE12FP0CL80 117 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 GAGE12GP0CL81 117 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 GAGE12IP0CL82 117 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 M6PRP20645 277 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 CD300CQ08708 224 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 BTN1A1Q13410 526 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 LYPD1Q8N2G4 141 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 EIF4E3Q8N5X7 224 aaKnown RBP16.13■□□□□ 0.17
CUL4A-209ENST00000488558 C11orf72Q8NBR9 251 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 ZNRF2Q8NHG8 242 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 PHYHIPLQ96FC7 376 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 C18orf15Q96N68 181 aa16.13■□□□□ 0.17
CUL4A-209ENST00000488558 PKD1P98161 4303 aa16.12■□□□□ 0.17
CUL4A-209ENST00000488558 OR7C2O60412 319 aa16.12■□□□□ 0.17
CUL4A-209ENST00000488558 IFNA5P01569 189 aa16.12■□□□□ 0.17
CUL4A-209ENST00000488558 GPX1P07203 203 aa16.12■□□□□ 0.17
CUL4A-209ENST00000488558 C1orf134Q5TEV5 83 aa16.12■□□□□ 0.17
CUL4A-209ENST00000488558 ZFAND2AQ8N6M9 145 aa16.12■□□□□ 0.17
CUL4A-209ENST00000488558 GNPNAT1Q96EK6 184 aaPredicted RBP16.12■□□□□ 0.17
CUL4A-209ENST00000488558 ZNF492Q9P255 531 aa16.12■□□□□ 0.17
CUL4A-209ENST00000488558 MBD2Q9UBB5 411 aa16.12■□□□□ 0.17
CUL4A-209ENST00000488558 PKHD1P08F94 4074 aa16.12■□□□□ 0.17
CUL4A-209ENST00000488558 TRAV26-1A0A087WT03 109 aa16.11■□□□□ 0.17
CUL4A-209ENST00000488558 OR5I1Q13606 314 aa16.11■□□□□ 0.17
CUL4A-209ENST00000488558 KHDC3LQ587J8 217 aa16.11■□□□□ 0.17
CUL4A-209ENST00000488558 FFAR4Q5NUL3 377 aa16.11■□□□□ 0.17
CUL4A-209ENST00000488558 SCGB1C1Q8TD33 95 aa16.11■□□□□ 0.17
CUL4A-209ENST00000488558 RXFP4Q8TDU9 374 aa16.11■□□□□ 0.17
CUL4A-209ENST00000488558 VGLL1Q99990 258 aa16.11■□□□□ 0.17
CUL4A-209ENST00000488558 LINC00588Q9Y4M8 146 aa16.11■□□□□ 0.17
CUL4A-209ENST00000488558 RBAKDNA6NC62 111 aa16.1■□□□□ 0.17
CUL4A-209ENST00000488558 HOXA5P20719 270 aa16.1■□□□□ 0.17
CUL4A-209ENST00000488558 RNASE4P34096 147 aaKnown RBP16.1■□□□□ 0.17
CUL4A-209ENST00000488558 ZNF138P52744 262 aa16.1■□□□□ 0.17
CUL4A-209ENST00000488558 TAS2R45P59539 299 aa16.1■□□□□ 0.17
CUL4A-209ENST00000488558 UBE2L3P68036 154 aaKnown RBP16.1■□□□□ 0.17
CUL4A-209ENST00000488558 IBA57Q5T440 356 aaKnown RBP16.1■□□□□ 0.17
CUL4A-209ENST00000488558 Q6ZTI0 123 aa16.1■□□□□ 0.17
CUL4A-209ENST00000488558 GSN-AS1Q9NRJ2 163 aa16.1■□□□□ 0.17
CUL4A-209ENST00000488558 KIAA1109Q2LD37 5005 aa16.09■□□□□ 0.17
CUL4A-209ENST00000488558 NBDYA0A0U1RRE5 68 aa16.09■□□□□ 0.17
CUL4A-209ENST00000488558 CSN1S1P47710 185 aa16.09■□□□□ 0.17
CUL4A-209ENST00000488558 SMIM3Q9BZL3 60 aa16.09■□□□□ 0.17
CUL4A-209ENST00000488558 TMPRSS5Q9H3S3 457 aa16.09■□□□□ 0.17
CUL4A-209ENST00000488558 TCL1AP56279 114 aa16.08■□□□□ 0.16
CUL4A-209ENST00000488558 PRR9Q5T870 116 aa16.08■□□□□ 0.16
CUL4A-209ENST00000488558 Q9H3A6 140 aa16.08■□□□□ 0.16
CUL4A-209ENST00000488558 DNAH11Q96DT5 4516 aa16.08■□□□□ 0.16
CUL4A-209ENST00000488558 RANP62826 216 aaKnown RBP16.07■□□□□ 0.16
CUL4A-209ENST00000488558 SSX7Q7RTT5 188 aa16.07■□□□□ 0.16
CUL4A-209ENST00000488558 RGS13O14921 159 aa16.06■□□□□ 0.16
CUL4A-209ENST00000488558 SPINK4O60575 86 aa16.06■□□□□ 0.16
CUL4A-209ENST00000488558 LENEPQ9Y5L5 61 aa16.06■□□□□ 0.16
CUL4A-209ENST00000488558 DYNC1H1Q14204 4646 aaKnown RBP16.05■□□□□ 0.16
CUL4A-209ENST00000488558 TRGV2A0A075B6R0 118 aa16.05■□□□□ 0.16
CUL4A-209ENST00000488558 IGHV1OR15-1A0A075B7D0 117 aa16.05■□□□□ 0.16
CUL4A-209ENST00000488558 A0A0J9YY99 117 aa16.05■□□□□ 0.16
CUL4A-209ENST00000488558 Q8TAT8 98 aa16.05■□□□□ 0.16
CUL4A-209ENST00000488558 ALG5Q9Y673 324 aa16.05■□□□□ 0.16
CUL4A-209ENST00000488558 TRGV1A0A0A0MS02 117 aa16.04■□□□□ 0.16
CUL4A-209ENST00000488558 PTTG1O95997 202 aa16.04■□□□□ 0.16
CUL4A-209ENST00000488558 ZNF266Q14584 549 aa16.04■□□□□ 0.16
CUL4A-209ENST00000488558 ACOT6Q3I5F7 207 aaPredicted RBP16.04■□□□□ 0.16
CUL4A-209ENST00000488558 TMED6Q8WW62 240 aa16.04■□□□□ 0.16
CUL4A-209ENST00000488558 ARPC5LQ9BPX5 153 aa16.04■□□□□ 0.16
CUL4A-209ENST00000488558 UPK3BQ9BT76 320 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms