RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 SLC39A9Q9NUM3 307 aa10.62□□□□□ -0.71
TRIM50-203ENST00000488217 ZNF253O75346 499 aa10.61□□□□□ -0.71
TRIM50-203ENST00000488217 SLC25A5P05141 298 aaKnown RBP10.61□□□□□ -0.71
TRIM50-203ENST00000488217 RAB32Q13637 225 aa10.61□□□□□ -0.71
TRIM50-203ENST00000488217 LINC00477Q96M19 166 aa10.61□□□□□ -0.71
TRIM50-203ENST00000488217 APOBP04114 4563 aaKnown RBP10.61□□□□□ -0.71
TRIM50-203ENST00000488217 NACAE9PAV3 2078 aa10.61□□□□□ -0.71
TRIM50-203ENST00000488217 TRBV19A0A075B6N1 114 aa10.6□□□□□ -0.71
TRIM50-203ENST00000488217 SULT1A1P50225 295 aa10.6□□□□□ -0.71
TRIM50-203ENST00000488217 ERCC8Q13216 396 aa10.6□□□□□ -0.71
TRIM50-203ENST00000488217 TTC32Q5I0X7 151 aa10.6□□□□□ -0.71
TRIM50-203ENST00000488217 Q6ZTI0 123 aa10.6□□□□□ -0.71
TRIM50-203ENST00000488217 TMEM252Q8N6L7 170 aa10.6□□□□□ -0.71
TRIM50-203ENST00000488217 MRPL53Q96EL3 112 aaKnown RBP10.6□□□□□ -0.71
TRIM50-203ENST00000488217 UPK3BQ9BT76 320 aa10.6□□□□□ -0.71
TRIM50-203ENST00000488217 TMEM14CQ9P0S9 112 aa10.6□□□□□ -0.71
TRIM50-203ENST00000488217 TIMM9Q9Y5J7 89 aa10.6□□□□□ -0.71
TRIM50-203ENST00000488217 MUC4Q99102 2169 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 M0R3E3 92 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
TRIM50-203ENST00000488217 HIST1H1EP10412 219 aaKnown RBP10.59□□□□□ -0.71
TRIM50-203ENST00000488217 S100A10P60903 97 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 BAXQ07812 192 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 ATP6V1FQ16864 119 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 C18orf15Q96N68 181 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 AGPAT4-IT1Q9H0P7 198 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 Q9H3A6 140 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 TMPRSS5Q9H3S3 457 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 GSN-AS1Q9NRJ2 163 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 LYRM2Q9NU23 88 aaPredicted RBP10.59□□□□□ -0.71
TRIM50-203ENST00000488217 PRELID1Q9Y255 219 aa10.59□□□□□ -0.71
TRIM50-203ENST00000488217 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 A0A1W2PPQ1 181 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 C7orf71A4D174 169 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 NDUFB4O95168 129 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 BTF3P20290 206 aaKnown RBP10.58□□□□□ -0.72
TRIM50-203ENST00000488217 RNASE4P34096 147 aaKnown RBP10.58□□□□□ -0.72
TRIM50-203ENST00000488217 HBG1P69891 147 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 HBG2P69892 147 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 CD300CQ08708 224 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 LRRC37A5PQ49AS3 106 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 PPP1R1CQ8WVI7 109 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 LINC00467Q9BRT7 94 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 KRTAP1-5Q9BYS1 174 aa10.58□□□□□ -0.72
TRIM50-203ENST00000488217 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
TRIM50-203ENST00000488217 UBE2L5PA0A1B0GUS4 154 aa10.57□□□□□ -0.72
TRIM50-203ENST00000488217 IGSF23A1L1A6 192 aa10.57□□□□□ -0.72
TRIM50-203ENST00000488217 KLLNB2CW77 178 aa10.57□□□□□ -0.72
TRIM50-203ENST00000488217 ANXA2RQ3ZCQ2 193 aa10.57□□□□□ -0.72
TRIM50-203ENST00000488217 STX12Q86Y82 276 aa10.57□□□□□ -0.72
TRIM50-203ENST00000488217 EIF4E3Q8N5X7 224 aaKnown RBP10.57□□□□□ -0.72
TRIM50-203ENST00000488217 MAPKAPK5-AS1Q8N8E1 139 aa10.57□□□□□ -0.72
TRIM50-203ENST00000488217 C11orf72Q8NBR9 251 aa10.57□□□□□ -0.72
TRIM50-203ENST00000488217 ZNF680Q8NEM1 530 aa10.57□□□□□ -0.72
TRIM50-203ENST00000488217 A0A096LPF7 62 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 H0YIZ8 118 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 MPDU1O75352 247 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 MPC2O95563 127 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 GPX1P07203 203 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 NMBP08949 121 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 GIPP09681 153 aaPredicted RBP10.56□□□□□ -0.72
TRIM50-203ENST00000488217 FGF7P21781 194 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 PDE6HQ13956 83 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 C9orf47Q6ZRZ4 202 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 EXOC3-AS1Q8N2X6 119 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 BLNKQ8WV28 456 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 ASB13Q8WXK3 278 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 OR5AC2Q9NZP5 309 aa10.56□□□□□ -0.72
TRIM50-203ENST00000488217 TRGV1A0A0A0MS02 117 aa10.55□□□□□ -0.72
TRIM50-203ENST00000488217 SPINK4O60575 86 aa10.55□□□□□ -0.72
TRIM50-203ENST00000488217 PYYP10082 97 aa10.55□□□□□ -0.72
TRIM50-203ENST00000488217 AAMDCQ9H7C9 122 aa10.55□□□□□ -0.72
TRIM50-203ENST00000488217 FUT9Q9Y231 359 aa10.55□□□□□ -0.72
TRIM50-203ENST00000488217 KLF12Q9Y4X4 402 aa10.55□□□□□ -0.72
TRIM50-203ENST00000488217 E5RGE8 158 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 NBEAP1P0C6P0 100 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 PET100P0DJ07 73 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 CRISP2P16562 243 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 NHLH2Q02577 135 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 BTN1A1Q13410 526 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 ICAM4Q14773 271 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 GCSAMLQ5JQS6 135 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 AKAP14Q86UN6 197 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 NPCDR1Q9BY65 106 aa10.54□□□□□ -0.72
TRIM50-203ENST00000488217 KRTAP10-2P60368 255 aa10.53□□□□□ -0.72
TRIM50-203ENST00000488217 Q5BKY6 102 aa10.53□□□□□ -0.72
TRIM50-203ENST00000488217 TMEM78Q5T7P6 136 aa10.53□□□□□ -0.72
TRIM50-203ENST00000488217 Q8N1X5 172 aa10.53□□□□□ -0.72
TRIM50-203ENST00000488217 FAM167A-AS1Q96KT0 104 aa10.53□□□□□ -0.72
TRIM50-203ENST00000488217 VGLL1Q99990 258 aa10.53□□□□□ -0.72
TRIM50-203ENST00000488217 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
TRIM50-203ENST00000488217 MBD2Q9UBB5 411 aa10.53□□□□□ -0.72
TRIM50-203ENST00000488217 PAX4O43316 350 aa10.52□□□□□ -0.73
TRIM50-203ENST00000488217 TCL1AP56279 114 aa10.52□□□□□ -0.73
TRIM50-203ENST00000488217 SLAQ13239 276 aa10.52□□□□□ -0.73
TRIM50-203ENST00000488217 FAM122CQ6P4D5 195 aa10.52□□□□□ -0.73
TRIM50-203ENST00000488217 MIR17HGQ75NE6 70 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms