RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 BOLA2Q9H3K6 86 aa0.23□□□□□ -2.37
R3HDM1-219ENST00000488035 BIN3Q9NQY0 253 aa0.23□□□□□ -2.37
R3HDM1-219ENST00000488035 ADGBQ8N7X0 1667 aa0.23□□□□□ -2.37
R3HDM1-219ENST00000488035 ANKRD31Q8N7Z5 1873 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 NUP210Q8TEM1 1887 aaPredicted RBP0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 PIK3C2AO00443 1686 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 CTTNBP2Q8WZ74 1663 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 MAP1LC3B2A6NCE7 125 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 S100A11P31949 105 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 MRPS36P82909 103 aaKnown RBP0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 TMEM78Q5T7P6 136 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 TRIQKQ629K1 86 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 HRCT1Q6UXD1 115 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 LINC00299Q6ZSB3 139 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 CROCCP2Q86T23 111 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 FKBP11Q9NYL4 201 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 BOKQ9UMX3 212 aaPredicted RBP0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 SYNMO15061 1565 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 LOC285556D6RIA3 1793 aa0.22□□□□□ -2.37
R3HDM1-219ENST00000488035 TRAPPC8Q9Y2L5 1435 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 TNCP24821 2201 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 FAT4Q6V0I7 4981 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 C3orf85A0A1B0GTC6 90 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 PPP5D1E7EU14 171 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 CCL4P13236 92 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 SPINK7P58062 85 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 CSAG1Q6PB30 78 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 TEX29Q8N6K0 151 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 C5orf17Q8NAS9 161 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 OR5H6Q8NGV6 325 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 CLEC2BQ92478 149 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 LPAR5Q9H1C0 372 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 NAV2Q8IVL1 2488 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 KIAA1107Q9UPP5 1409 aa0.21□□□□□ -2.38
R3HDM1-219ENST00000488035 NINQ8N4C6 2090 aa0.2□□□□□ -2.38
R3HDM1-219ENST00000488035 A0A1W2PRE2 83 aa0.2□□□□□ -2.38
R3HDM1-219ENST00000488035 E5RI56 91 aa0.2□□□□□ -2.38
R3HDM1-219ENST00000488035 CASC2Q6XLA1 102 aa0.2□□□□□ -2.38
R3HDM1-219ENST00000488035 STX12Q86Y82 276 aa0.2□□□□□ -2.38
R3HDM1-219ENST00000488035 OR4B1Q8NGF8 309 aa0.2□□□□□ -2.38
R3HDM1-219ENST00000488035 NABP2Q9BQ15 211 aa0.2□□□□□ -2.38
R3HDM1-219ENST00000488035 PLAC8Q9NZF1 115 aa0.2□□□□□ -2.38
R3HDM1-219ENST00000488035 LAMTOR3Q9UHA4 124 aa0.2□□□□□ -2.38
R3HDM1-219ENST00000488035 ANK1P16157 1881 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 LOC107984156A0A0G2JMH3 177 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 C5orf58C9J3I9 102 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 LY6G6CO95867 125 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 IGHV3-30P01768 117 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 TRACP01848 142 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 IGHV3-30-5P0DP03 117 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 BCL2P10415 239 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 KDELR1P24390 212 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 SDC2P34741 201 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 QRFPP83859 136 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 Q6ZS92 163 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 ARL17AQ8IVW1 177 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 ISOC1Q96CN7 298 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 PRELID3AQ96N28 172 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 MCEEQ96PE7 176 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 PCBD2Q9H0N5 130 aa0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 YTHDC2Q9H6S0 1430 aaKnown RBP0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 SYNE2Q8WXH0 6885 aaKnown RBP0.19□□□□□ -2.38
R3HDM1-219ENST00000488035 TRPM7Q96QT4 1865 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 A0A1W2PRS3 328 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 A6NN06 94 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 NDUFA6P56556 154 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 MAXP61244 160 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 GLYATL3Q5SZD4 288 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 LINC00305Q7Z4B0 112 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 C10orf111Q8N326 155 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 OR5AK2Q8NH90 309 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 LINC00208Q96KT6 92 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 DLC1Q96QB1 1528 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 USP54Q70EL1 1684 aa0.18□□□□□ -2.38
R3HDM1-219ENST00000488035 DSPPQ9NZW4 1301 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 MEGF8Q7Z7M0 2845 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 TRBV27A0A0K0K1C4 114 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 SULT1C4O75897 302 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 TPT1P13693 172 aaKnown RBP0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 RPL7P18124 248 aaKnown RBP0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 FAM135BQ49AJ0 1406 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 IZUMO2Q6UXV1 221 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 FGD6Q6ZV73 1430 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 CIB3Q96Q77 187 aaPredicted RBP0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 COMMD3Q9UBI1 195 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 JPT1Q9UK76 154 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 TRAPPC2LQ9UL33 140 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 LAMTOR2Q9Y2Q5 125 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 MED31Q9Y3C7 131 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 KIAA1549LQ6ZVL6 1849 aa0.17□□□□□ -2.38
R3HDM1-219ENST00000488035 TCOF1Q13428 1488 aaKnown RBP0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 MAST4O15021 2626 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 TRAV13-1A0A0B4J241 112 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 LOC101927531A0A1B0GV80 90 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 H3BMG7 143 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 SLC25A4P12235 298 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 POLR2HP52434 150 aaKnown RBP0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 CAV3P56539 151 aa0.16□□□□□ -2.38
R3HDM1-219ENST00000488035 SNRPD3P62318 126 aaKnown RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms