RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 C1orf43Q9BWL3 253 aa12.27□□□□□ -0.45
PKD1-220ENST00000487932 PIFOQ8TCI5 191 aa12.27□□□□□ -0.45
PKD1-220ENST00000487932 SPTBN2O15020 2390 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 CACNA1EQ15878 2313 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 J3QLI3 93 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 LMO1P25800 156 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 C4orf48Q5BLP8 95 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 IGFBPL1Q8WX77 278 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 NDUFA12Q9UI09 145 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 DIDO1Q9BTC0 2240 aaKnown RBP12.26□□□□□ -0.45
PKD1-220ENST00000487932 ADAMTS7Q9UKP4 1686 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 B3GALT5-AS1P59052 145 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 SPTBN1Q01082 2364 aaKnown RBP12.26□□□□□ -0.45
PKD1-220ENST00000487932 ETDCA0A1B0GVM5 59 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 DEFB112Q30KQ8 113 aa12.26□□□□□ -0.45
PKD1-220ENST00000487932 NDUFA4O00483 81 aa12.25□□□□□ -0.45
PKD1-220ENST00000487932 IGHV4-59P01825 116 aa12.25□□□□□ -0.45
PKD1-220ENST00000487932 U3KQE9 123 aa12.25□□□□□ -0.45
PKD1-220ENST00000487932 COL4A1P02462 1669 aa12.25□□□□□ -0.45
PKD1-220ENST00000487932 FGF6P10767 208 aa12.25□□□□□ -0.45
PKD1-220ENST00000487932 GVINP1Q7Z2Y8 2422 aa12.25□□□□□ -0.45
PKD1-220ENST00000487932 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
PKD1-220ENST00000487932 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
PKD1-220ENST00000487932 EGR2P11161 476 aaPredicted RBP12.25□□□□□ -0.45
PKD1-220ENST00000487932 SRSF8Q9BRL6 282 aaKnown RBP12.25□□□□□ -0.45
PKD1-220ENST00000487932 CCL18P55774 89 aa12.25□□□□□ -0.45
PKD1-220ENST00000487932 CFHR4Q92496 578 aa12.25□□□□□ -0.45
PKD1-220ENST00000487932 CACNA1DQ01668 2161 aa12.24□□□□□ -0.45
PKD1-220ENST00000487932 TRACP01848 142 aa12.24□□□□□ -0.45
PKD1-220ENST00000487932 PDE6HQ13956 83 aa12.24□□□□□ -0.45
PKD1-220ENST00000487932 TPSG1Q9NRR2 321 aa12.24□□□□□ -0.45
PKD1-220ENST00000487932 COL6A6A6NMZ7 2263 aa12.24□□□□□ -0.45
PKD1-220ENST00000487932 ARTNQ5T4W7 220 aa12.24□□□□□ -0.45
PKD1-220ENST00000487932 SDK2Q58EX2 2172 aa12.24□□□□□ -0.45
PKD1-220ENST00000487932 F6UB75 175 aa12.24□□□□□ -0.45
PKD1-220ENST00000487932 HEATR1Q9H583 2144 aaKnown RBP12.24□□□□□ -0.45
PKD1-220ENST00000487932 CEP250Q9BV73 2442 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 POLEQ07864 2286 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 ZNF134P52741 427 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 Q8N8P6 123 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 J3QRE1 110 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 PRSS46E5RG02 174 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 DOCK10Q96BY6 2186 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 LRRC37AA6NMS7 1700 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 UBE2AP49459 152 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 BAALCQ8WXS3 180 aa12.23□□□□□ -0.45
PKD1-220ENST00000487932 CADP27708 2225 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 MRPL51Q4U2R6 128 aaKnown RBP12.22□□□□□ -0.45
PKD1-220ENST00000487932 C9orf66Q5T8R8 295 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 C5orf38Q86SI9 138 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 BOD1L2Q8IYS8 172 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 MRPL27Q9P0M9 148 aaKnown RBP12.22□□□□□ -0.45
PKD1-220ENST00000487932 TP53BP1Q12888 1972 aaPredicted RBP12.22□□□□□ -0.45
PKD1-220ENST00000487932 FGF16O43320 207 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 SLURP1P55000 103 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 IGHV7-4-1A0A0J9YVY3 117 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 RHOHQ15669 191 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 CYTL1Q9NRR1 136 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 LRRK1Q38SD2 2015 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 SPRY2O43597 315 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 BRCA1P38398 1863 aaKnown RBP12.22□□□□□ -0.45
PKD1-220ENST00000487932 GP9P14770 177 aa12.22□□□□□ -0.45
PKD1-220ENST00000487932 TMEM190Q8WZ59 177 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 CAMK2N2Q96S95 79 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 TRBV24-1A0A075B6N3 115 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 HERVK_113P63121 156 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 LHFPL1Q86WI0 220 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 GNRH2O43555 120 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 ZNF124Q15973 351 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 KIF26BQ2KJY2 2108 aa12.21□□□□□ -0.45
PKD1-220ENST00000487932 Q6ZRM9 215 aa12.21□□□□□ -0.46
PKD1-220ENST00000487932 YPEL3P61236 119 aaPredicted RBP12.21□□□□□ -0.46
PKD1-220ENST00000487932 DIAPH2-AS1Q14236 149 aa12.21□□□□□ -0.46
PKD1-220ENST00000487932 TRBV19A0A075B6N1 114 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 NDUFS7O75251 213 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 CSRP3P50461 194 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 LOC105371267A0A1B0GV96 52 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 TET1Q8NFU7 2136 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 CARD19Q96LW7 228 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 SHISA9B4DS77 424 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 DEFB4AO15263 64 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 GYPEP15421 78 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 FAM104BQ5XKR9 115 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 DOCK7Q96N67 2140 aa12.2□□□□□ -0.46
PKD1-220ENST00000487932 SLAQ13239 276 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 MRPL53Q96EL3 112 aaKnown RBP12.19□□□□□ -0.46
PKD1-220ENST00000487932 C1orf194Q5T5A4 169 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 WDR86Q86TI4 376 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 FANCD2OSQ96PS1 177 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 MRPL52Q86TS9 123 aaKnown RBP12.19□□□□□ -0.46
PKD1-220ENST00000487932 NDUFA4L2Q9NRX3 87 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 SCN10AQ9Y5Y9 1956 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 SCN5AQ14524 2016 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 WNK3Q9BYP7 1800 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 ZNF833PQ6ZTB9 187 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 ICOSQ9Y6W8 199 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 LOC285556D6RIA3 1793 aa12.19□□□□□ -0.46
PKD1-220ENST00000487932 CYYR1Q96J86 154 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms