RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 CDKN1BP46527 198 aa8.82□□□□□ -1
SFXN3-206ENST00000487721 CSN1S1P47710 185 aa8.82□□□□□ -1
SFXN3-206ENST00000487721 NANOS2P60321 138 aaKnown RBP8.82□□□□□ -1
SFXN3-206ENST00000487721 RBMY1FQ15415 496 aaKnown RBP8.82□□□□□ -1
SFXN3-206ENST00000487721 RRN3P1Q2M238 152 aa8.82□□□□□ -1
SFXN3-206ENST00000487721 ALKAL2Q6UX46 152 aa8.82□□□□□ -1
SFXN3-206ENST00000487721 DPPA3Q6W0C5 159 aa8.82□□□□□ -1
SFXN3-206ENST00000487721 IQCF2Q8IXL9 164 aa8.82□□□□□ -1
SFXN3-206ENST00000487721 PHLDA1Q8WV24 401 aaPredicted RBP8.82□□□□□ -1
SFXN3-206ENST00000487721 PHYHIPLQ96FC7 376 aa8.82□□□□□ -1
SFXN3-206ENST00000487721 MAP1LC3BQ9GZQ8 125 aa8.82□□□□□ -1
SFXN3-206ENST00000487721 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
SFXN3-206ENST00000487721 NDUFB4O95168 129 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 SPART-AS1P0CW21 52 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 LEPP41159 167 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 SULT1A2P50226 295 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 RAB5CP51148 216 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 FGF8P55075 233 aaPredicted RBP8.81□□□□□ -1
SFXN3-206ENST00000487721 ICAM4Q14773 271 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 FAM74A1Q5RGS3 127 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 LYPD1Q8N2G4 141 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 TMEM256Q8N2U0 113 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 LINC01587Q99440 93 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 STARD9Q9P2P6 4700 aa8.81□□□□□ -1
SFXN3-206ENST00000487721 LYSTQ99698 3801 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 TRAV12-2A0A075B6T6 113 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 PRAC2D3DTV9 90 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 EMP1P54849 157 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 C1orf158Q8N1D5 194 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 EXOC3-AS1Q8N2X6 119 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 LINC00477Q96M19 166 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 ODF3Q96PU9 254 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 TMEM167BQ9NRX6 74 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 CSMD3Q7Z407 3707 aa8.8□□□□□ -1
SFXN3-206ENST00000487721 LOC102723971A0A1B0GUV8 181 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 A0A1B0GV50 99 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 NPIPB6E9PJ23 425 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 M0R3E3 92 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 H2AFB1P0C5Y9 115 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 RANP62826 216 aaKnown RBP8.79□□□□□ -1
SFXN3-206ENST00000487721 TMEM78Q5T7P6 136 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 RXFP4Q8TDU9 374 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 C2CD4CQ8TF44 421 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 SFT2D1Q8WV19 159 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 MBD3L1Q8WWY6 194 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 C20orf144Q9BQM9 153 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 Q9H3A6 140 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 TMPRSS5Q9H3S3 457 aa8.79□□□□□ -1
SFXN3-206ENST00000487721 TRAV10A0A0B4J240 114 aa8.78□□□□□ -1
SFXN3-206ENST00000487721 H7BYZ3 331 aa8.78□□□□□ -1
SFXN3-206ENST00000487721 CRXO43186 299 aaPredicted RBP8.78□□□□□ -1
SFXN3-206ENST00000487721 PRB4P10163 310 aaPredicted RBP8.78□□□□□ -1
SFXN3-206ENST00000487721 TAS2R60P59551 318 aa8.78□□□□□ -1
SFXN3-206ENST00000487721 CMTM2Q8TAZ6 248 aa8.78□□□□□ -1
SFXN3-206ENST00000487721 SUN5Q8TC36 379 aa8.78□□□□□ -1
SFXN3-206ENST00000487721 NIPSNAP3BQ9BS92 247 aa8.78□□□□□ -1
SFXN3-206ENST00000487721 DNAH1Q9P2D7 4330 aa8.77□□□□□ -1
SFXN3-206ENST00000487721 CT45A10P0DMU9 189 aa8.77□□□□□ -1.01
SFXN3-206ENST00000487721 HTN1P15515 57 aa8.77□□□□□ -1.01
SFXN3-206ENST00000487721 TCTAP57738 103 aa8.77□□□□□ -1.01
SFXN3-206ENST00000487721 CCDC28AQ8IWP9 274 aa8.77□□□□□ -1.01
SFXN3-206ENST00000487721 OTORQ9NRC9 128 aa8.77□□□□□ -1.01
SFXN3-206ENST00000487721 PGPA6NDG6 321 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 ZNF705GA8MUZ8 300 aaPredicted RBP8.76□□□□□ -1.01
SFXN3-206ENST00000487721 TEX46H3BTG2 121 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 SLC25A5P05141 298 aaKnown RBP8.76□□□□□ -1.01
SFXN3-206ENST00000487721 UBE2G2P60604 165 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 ERCC8Q13216 396 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 TEX261Q6UWH6 196 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 ZNF493Q6ZR52 646 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 C9orf47Q6ZRZ4 202 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 Q6ZTC4 211 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 AGPAT4-IT1Q9H0P7 198 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 RPH3ALQ9UNE2 315 aa8.76□□□□□ -1.01
SFXN3-206ENST00000487721 YTHDF2Q9Y5A9 579 aaKnown RBP8.76□□□□□ -1.01
SFXN3-206ENST00000487721 HYDINQ4G0P3 5121 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 A0A1W2PRE2 83 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 RBAKDNA6NC62 111 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 LYRM9A8MSI8 78 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 IGLL5B9A064 214 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 J3KRW8 73 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 GPX1P07203 203 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 NMBP08949 121 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 ZNF138P52744 262 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 C12orf74Q32Q52 190 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 FAM222AQ5U5X8 452 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 GFI1BQ5VTD9 330 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 ARL6IP6Q8N6S5 226 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 C16orf74Q96GX8 76 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 DKK2Q9UBU2 259 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 CELA1Q9UNI1 258 aa8.75□□□□□ -1.01
SFXN3-206ENST00000487721 PLECQ15149 4684 aaKnown RBP8.74□□□□□ -1.01
SFXN3-206ENST00000487721 IGKV2-40A0A087WW87 121 aaPredicted RBP8.74□□□□□ -1.01
SFXN3-206ENST00000487721 DEFB131BA0A096LNP1 70 aa8.74□□□□□ -1.01
SFXN3-206ENST00000487721 TRAV1-1A0A0B4J248 108 aa8.74□□□□□ -1.01
SFXN3-206ENST00000487721 TRAV12-3A0A0B4J271 114 aa8.74□□□□□ -1.01
SFXN3-206ENST00000487721 TRBV7-9A0A0J9YWB2 115 aa8.74□□□□□ -1.01
SFXN3-206ENST00000487721 FAM74A7A6NL05 159 aa8.74□□□□□ -1.01
SFXN3-206ENST00000487721 GGTLC3B5MD39 225 aa8.74□□□□□ -1.01
SFXN3-206ENST00000487721 IGKV2D-40P01614 121 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms