RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 NPFFO15130 113 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 DLEU1O43261 78 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 YPEL1O60688 119 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 ERC2-IT1O76042 136 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 LINC00694P0DN24 101 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 SLC25A4P12235 298 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 CKS2P33552 79 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 ZNF93P35789 620 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 ETV6P41212 452 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 GUCA1AP43080 201 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 PCBD1P61457 104 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 BLCAPP62952 87 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 EMX2Q04743 252 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 NEDD8Q15843 81 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 UNQ6190/PRO20217Q6UXQ8 127 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 TMEM91Q6ZNR0 172 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 TEN1Q86WV5 123 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 OR4C6Q8NH72 309 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 CCL4L1Q8NHW4 92 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 LINC00470Q9BZP3 86 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 FKBP11Q9NYL4 201 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 COMMD3Q9UBI1 195 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 MALRD1Q5VYJ5 2156 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 NUMA1Q14980 2115 aa1.24□□□□□ -2.21
HMGB1P36-201ENST00000487709 KDM6AO15550 1401 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 DIDO1Q9BTC0 2240 aaKnown RBP1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 FRMPD1Q5SYB0 1578 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 A0A087WSZ3 146 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 TRAV10A0A0B4J240 114 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 C2orf70A6NJV1 201 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 GNG7O60262 68 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 IGLV1-51P01701 117 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 SNRPD3P62318 126 aaKnown RBP1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 PDE6HQ13956 83 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 DIAPH2-AS1Q14236 149 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 ASB16-AS1Q495Z4 193 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 CLECL1Q8IZS7 167 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 ATOH7Q8N100 152 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 C10orf111Q8N326 155 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 TMEM203Q969S6 136 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 C2orf88Q9BSF0 95 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 GGACTQ9BVM4 153 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 TMEM191AQ9H0A3 160 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 CST11Q9H112 138 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 METTL1Q9UBP6 276 aaKnown RBP1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 TNS3Q68CZ2 1445 aa1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 SMG6Q86US8 1419 aaKnown RBP1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 PRG4Q92954 1404 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 INTS1Q8N201 2190 aaKnown RBP1.23□□□□□ -2.21
HMGB1P36-201ENST00000487709 ROCK2O75116 1388 aaKnown RBP1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 ZNF106Q9H2Y7 1883 aaKnown RBP1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 IBTKQ9P2D0 1353 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 CCDC88CQ9P219 2028 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 PCDH15Q96QU1 1955 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 C3orf85A0A1B0GTC6 90 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 MIF4GDA9UHW6 222 aaKnown RBP1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 LINC00587B1AMM8 73 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 B4DSR2 109 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 ZNF670-ZNF695F2Z2N8 137 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 CDC42EP2O14613 210 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 LYNX1P0DP58 116 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 CXCL8P10145 99 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 CCL4P13236 92 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 DEFB113Q30KQ7 82 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 IZUMO2Q6UXV1 221 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 CASC2Q6XLA1 102 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 OR5AS1Q8N127 324 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 NABP2Q9BQ15 211 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 SMIM7Q9BQ49 75 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 SLC35B3Q9H1N7 401 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 SAR1AQ9NR31 198 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 CCDC167Q9P0B6 97 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 DNAJC15Q9Y5T4 150 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 BAZ2BQ9UIF8 2168 aaKnown RBP1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 COL4A1P02462 1669 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 BRWD1Q9NSI6 2320 aa1.22□□□□□ -2.21
HMGB1P36-201ENST00000487709 GLI3P10071 1580 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 KDM5CP41229 1560 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 COL1A1P02452 1464 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 TRBV20-1A0A075B6N2 111 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 IGHV1-24A0A0C4DH33 117 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 LOC107984156A0A0G2JMH3 177 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 FAM236AA0A1B0GUQ0 79 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 FAM236BA0A1B0GV22 79 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 IFITM5A6NNB3 132 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 BBIP1A8MTZ0 92 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 C5orf67F2Z3F1 127 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 IFNGP01579 166 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 CD2P06729 351 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 S100PP25815 95 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 C1orf137Q5JT78 98 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 CLLU1Q5K131 121 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 SCIMPQ6UWF3 145 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 ZNF833PQ6ZTB9 187 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 GKN2Q86XP6 184 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 ARL17AQ8IVW1 177 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 OTOSQ8NHW6 89 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 CIB3Q96Q77 187 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 MPC1Q9Y5U8 109 aa1.21□□□□□ -2.22
HMGB1P36-201ENST00000487709 NAIPQ13075 1403 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms