RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CLEC19AQ6UXS0 136 aa20.16■□□□□ 0.82
HLA-C-208ENST00000487245 FER1L6-AS1Q8NA97 138 aa20.16■□□□□ 0.82
HLA-C-208ENST00000487245 SIGLEC8Q9NYZ4 499 aa20.16■□□□□ 0.82
HLA-C-208ENST00000487245 IGHV4-61A0A0C4DH41 118 aa20.16■□□□□ 0.82
HLA-C-208ENST00000487245 LINC01548A6NM66 108 aa20.16■□□□□ 0.82
HLA-C-208ENST00000487245 ZNF80P51504 273 aaPredicted RBP20.16■□□□□ 0.82
HLA-C-208ENST00000487245 MRPL51Q4U2R6 128 aaKnown RBP20.16■□□□□ 0.82
HLA-C-208ENST00000487245 SLC50A1Q9BRV3 221 aa20.16■□□□□ 0.82
HLA-C-208ENST00000487245 IFI27P40305 119 aaPredicted RBP20.15■□□□□ 0.82
HLA-C-208ENST00000487245 AMN1Q8IY45 258 aa20.15■□□□□ 0.82
HLA-C-208ENST00000487245 CNFNQ9BYD5 112 aa20.15■□□□□ 0.82
HLA-C-208ENST00000487245 RELNP78509 3460 aa20.15■□□□□ 0.82
HLA-C-208ENST00000487245 A0A096LNJ9 63 aa20.14■□□□□ 0.81
HLA-C-208ENST00000487245 TRAV41A0A0B4J266 112 aa20.14■□□□□ 0.81
HLA-C-208ENST00000487245 FAM223BA6NKX1 122 aa20.14■□□□□ 0.81
HLA-C-208ENST00000487245 ZNF575Q86XF7 245 aa20.14■□□□□ 0.81
HLA-C-208ENST00000487245 FAM223AQ8IWN6 122 aa20.14■□□□□ 0.81
HLA-C-208ENST00000487245 DPF1Q92782 380 aa20.14■□□□□ 0.81
HLA-C-208ENST00000487245 COX11Q9Y6N1 276 aa20.14■□□□□ 0.81
HLA-C-208ENST00000487245 TACC2O95359 2948 aa20.14■□□□□ 0.81
HLA-C-208ENST00000487245 IGHV3-35A0A0C4DH35 117 aa20.13■□□□□ 0.81
HLA-C-208ENST00000487245 C19orf54Q5BKX5 351 aa20.13■□□□□ 0.81
HLA-C-208ENST00000487245 Q8TAT8 98 aa20.13■□□□□ 0.81
HLA-C-208ENST00000487245 NPFFR1Q9GZQ6 430 aa20.13■□□□□ 0.81
HLA-C-208ENST00000487245 PIFOQ8TCI5 191 aa20.13■□□□□ 0.81
HLA-C-208ENST00000487245 METTL26Q96S19 204 aa20.13■□□□□ 0.81
HLA-C-208ENST00000487245 HLA-DMBP28068 263 aa20.12■□□□□ 0.81
HLA-C-208ENST00000487245 PMCHL2Q9BQD1 86 aa20.12■□□□□ 0.81
HLA-C-208ENST00000487245 CLPSL1A2RUU4 121 aa20.11■□□□□ 0.81
HLA-C-208ENST00000487245 FABP5P3A8MUU1 101 aa20.11■□□□□ 0.81
HLA-C-208ENST00000487245 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.11■□□□□ 0.81
HLA-C-208ENST00000487245 TMEM219Q86XT9 240 aa20.11■□□□□ 0.81
HLA-C-208ENST00000487245 ZNF738Q8NE65 137 aa20.11■□□□□ 0.81
HLA-C-208ENST00000487245 IGHV3OR16-8A0A075B7F1 116 aa20.11■□□□□ 0.81
HLA-C-208ENST00000487245 ATP5J2P56134 94 aa20.11■□□□□ 0.81
HLA-C-208ENST00000487245 LINC01559Q495D7 138 aa20.11■□□□□ 0.81
HLA-C-208ENST00000487245 IGHV3OR16-10A0A075B7F0 116 aa20.1■□□□□ 0.81
HLA-C-208ENST00000487245 TRAV40A0A0B4J280 105 aa20.1■□□□□ 0.81
HLA-C-208ENST00000487245 MRPL53Q96EL3 112 aaKnown RBP20.1■□□□□ 0.81
HLA-C-208ENST00000487245 MED13LQ71F56 2210 aa20.09■□□□□ 0.81
HLA-C-208ENST00000487245 IGFL4Q6B9Z1 124 aa20.09■□□□□ 0.81
HLA-C-208ENST00000487245 U3KQE9 123 aa20.09■□□□□ 0.81
HLA-C-208ENST00000487245 TWIST1Q15672 202 aa20.09■□□□□ 0.81
HLA-C-208ENST00000487245 LGALS9BQ3B8N2 356 aa20.09■□□□□ 0.81
HLA-C-208ENST00000487245 FAM106AQ4KMX7 169 aa20.09■□□□□ 0.81
HLA-C-208ENST00000487245 LGALS9CQ6DKI2 356 aa20.09■□□□□ 0.81
HLA-C-208ENST00000487245 LINC01546A6NGU7 62 aa20.08■□□□□ 0.81
HLA-C-208ENST00000487245 BRI3O95415 125 aa20.08■□□□□ 0.81
HLA-C-208ENST00000487245 PPBPP02775 128 aa20.08■□□□□ 0.81
HLA-C-208ENST00000487245 LOXL1Q08397 574 aaPredicted RBP20.08■□□□□ 0.81
HLA-C-208ENST00000487245 C12orf54Q6X4T0 127 aa20.08■□□□□ 0.81
HLA-C-208ENST00000487245 COX8AP10176 69 aa20.07■□□□□ 0.8
HLA-C-208ENST00000487245 BRD3OSQ6XYD6 125 aa20.07■□□□□ 0.8
HLA-C-208ENST00000487245 SPOCK3Q9BQ16 436 aa20.07■□□□□ 0.8
HLA-C-208ENST00000487245 NCR2O95944 276 aa20.07■□□□□ 0.8
HLA-C-208ENST00000487245 HBDP02042 147 aa20.07■□□□□ 0.8
HLA-C-208ENST00000487245 IGF1P05019 195 aa20.07■□□□□ 0.8
HLA-C-208ENST00000487245 CKS2P33552 79 aa20.07■□□□□ 0.8
HLA-C-208ENST00000487245 MPV17L2Q567V2 206 aa20.07■□□□□ 0.8
HLA-C-208ENST00000487245 MCRIP2Q9BUT9 160 aaKnown RBP20.07■□□□□ 0.8
HLA-C-208ENST00000487245 HIF1ANQ9NWT6 349 aa20.07■□□□□ 0.8
HLA-C-208ENST00000487245 LOC389332A0A1B0GUA5 103 aa20.06■□□□□ 0.8
HLA-C-208ENST00000487245 PRAC2D3DTV9 90 aa20.06■□□□□ 0.8
HLA-C-208ENST00000487245 H3BUA1 57 aa20.06■□□□□ 0.8
HLA-C-208ENST00000487245 HIST1H1AQ02539 215 aaPredicted RBP20.06■□□□□ 0.8
HLA-C-208ENST00000487245 BVES-AS1Q5T3Y7 98 aa20.06■□□□□ 0.8
HLA-C-208ENST00000487245 H0Y8G0 127 aa20.05■□□□□ 0.8
HLA-C-208ENST00000487245 ORM1P02763 201 aa20.05■□□□□ 0.8
HLA-C-208ENST00000487245 TRGV3P03979 118 aa20.05■□□□□ 0.8
HLA-C-208ENST00000487245 RNF185Q96GF1 192 aa20.05■□□□□ 0.8
HLA-C-208ENST00000487245 TIMM8BQ9Y5J9 83 aaPredicted RBP20.05■□□□□ 0.8
HLA-C-208ENST00000487245 NPYP01303 97 aa20.05■□□□□ 0.8
HLA-C-208ENST00000487245 ERCC8Q13216 396 aa20.05■□□□□ 0.8
HLA-C-208ENST00000487245 OR1N2Q8NGR9 330 aa20.05■□□□□ 0.8
HLA-C-208ENST00000487245 PPP1R14DQ9NXH3 145 aa20.05■□□□□ 0.8
HLA-C-208ENST00000487245 TP73-AS1Q9UF72 201 aa20.05■□□□□ 0.8
HLA-C-208ENST00000487245 IGHV4-30-2A0A087WSY4 118 aa20.04■□□□□ 0.8
HLA-C-208ENST00000487245 MSMBP08118 114 aa20.04■□□□□ 0.8
HLA-C-208ENST00000487245 DSCR9P59020 149 aa20.04■□□□□ 0.8
HLA-C-208ENST00000487245 A6NDX4 124 aa20.03■□□□□ 0.8
HLA-C-208ENST00000487245 NUDT3O95989 172 aa20.03■□□□□ 0.8
HLA-C-208ENST00000487245 UBE2V1Q13404 147 aa20.03■□□□□ 0.8
HLA-C-208ENST00000487245 TCF21O43680 179 aa20.03■□□□□ 0.8
HLA-C-208ENST00000487245 IGHV4-38-2P0DP08 117 aa20.03■□□□□ 0.8
HLA-C-208ENST00000487245 TRAV8-2A0A0B4J237 113 aa20.02■□□□□ 0.8
HLA-C-208ENST00000487245 IGHG2P01859 326 aa20.02■□□□□ 0.8
HLA-C-208ENST00000487245 OR8A1Q8NGG7 326 aa20.02■□□□□ 0.8
HLA-C-208ENST00000487245 USMG5Q96IX5 58 aa20.02■□□□□ 0.8
HLA-C-208ENST00000487245 ITPR1Q14643 2758 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 MUC21A0A0G2JKD1 596 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 MUC21A0A140T8X8 626 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 MUC21Q5SSG8 566 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 IGHV3-66A0A0C4DH42 116 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 CCL25O15444 150 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 ARL3P36405 182 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 DEFB125Q8N687 156 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 RNF182Q8N6D2 247 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 AGPAT4-IT1Q9H0P7 198 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 MAP1LC3AQ9H492 121 aa20.01■□□□□ 0.79
HLA-C-208ENST00000487245 ACACBO00763 2458 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms