RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 C17orf77Q96MU5 243 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 SLC50A1Q9BRV3 221 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 CLEC5AQ9NY25 188 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 COL6A6A6NMZ7 2263 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 MYO18BQ8IUG5 2567 aa5.46□□□□□ -1.54
SMARCAL1-212ENST00000486983 TACC2O95359 2948 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 LOC102724200A0A096LPH7 203 aaPredicted RBP5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGHV1-69DA0A0B4J2H0 117 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 C20orf202A1L168 122 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 CHEK1O14757 476 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 HSBP1O75506 76 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGHV1-69P01742 117 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 BMI1P35226 326 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 RHOGP84095 191 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 PMCHL1Q16048 86 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 ZNF493Q6ZR52 646 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 BORCS7Q96B45 105 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 PGLYRP4Q96LB8 373 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 CCL19Q99731 98 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 VAMP8Q9BV40 100 aa5.45□□□□□ -1.54
SMARCAL1-212ENST00000486983 RELNP78509 3460 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 M0QZK8 103 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 M0R3E3 92 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 CRXO43186 299 aaPredicted RBP5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 BUB3O43684 328 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGF1P05019 195 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 OR5AL1P0C617 328 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 C3orf79P0CE67 100 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 GPR183P32249 361 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 CTRLP40313 264 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 CRIP1P50238 77 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 DSCR9P59020 149 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 KRTDAPP60985 99 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 ECSCRQ19T08 205 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 CLEC2AQ6UVW9 174 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 PRR25Q96S07 402 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 MIEN1Q9BRT3 115 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 HIF1ANQ9NWT6 349 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 ZMAT5Q9UDW3 170 aaKnown RBP5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 ZNF580Q9UK33 172 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 SMAD5-AS1Q9Y6J3 95 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 S4R3C0 116 aa5.44□□□□□ -1.54
SMARCAL1-212ENST00000486983 ASH1LQ9NR48 2969 aaKnown RBP5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 TRAV41A0A0B4J266 112 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGHV4-61A0A0C4DH41 118 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 CLPSL1A2RUU4 121 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 M0R2Z0 102 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 SH2D1AO60880 128 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGHV3-23P01764 117 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGHG4P01861 327 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 CLEC3BP05452 202 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 RNF224P0DH78 156 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 GATA3P23771 443 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 BCL6BQ8N143 479 aaPredicted RBP5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 PIFOQ8TCI5 191 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 URB1-AS1Q96HZ7 61 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 METTL26Q96S19 204 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 CNFNQ9BYD5 112 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 PPP1R14DQ9NXH3 145 aa5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 FLNBO75369 2602 aaKnown RBP5.43□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGKV2-40A0A087WW87 121 aaPredicted RBP5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 TRAV40A0A0B4J280 105 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGHV1-24A0A0C4DH33 117 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 A1L4Q6 167 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 TMEM189A5PLL7 270 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 C2orf70A6NJV1 201 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 M0R143 59 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGKV2D-40P01614 121 aaPredicted RBP5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 MSMBP08118 114 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 ARMS2P0C7Q2 107 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 LINC00614P0C842 121 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGLC6P0CF74 106 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 BTF3P20290 206 aaKnown RBP5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 NTF3P20783 257 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 ATP5G2Q06055 141 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 LCN12Q6JVE5 192 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 RNASEKQ6P5S7 137 aaKnown RBP5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 KLHDC1Q8N7A1 406 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 USMG5Q96IX5 58 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 U3KQK5 164 aa5.42□□□□□ -1.54
SMARCAL1-212ENST00000486983 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 A6NDX4 124 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 G3V318 75 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGHG2P01859 326 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 SLC25A16P16260 332 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 SSTP61278 116 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 EBLN2Q6P2I7 272 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 CLEC19AQ6UXS0 136 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 C9orf139Q6ZV77 190 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 Q71RC1 249 aaPredicted RBP5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 FAM19A2Q8N3H0 131 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 LINC00469Q8N7U9 141 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 TMEM70Q9BUB7 260 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 UQCR10Q9UDW1 63 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 PAM16Q9Y3D7 125 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 LENEPQ9Y5L5 61 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 ABCA4P78363 2273 aa5.41□□□□□ -1.54
SMARCAL1-212ENST00000486983 IGHV4-30-2A0A087WSY4 118 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms