RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SS18L1O75177 396 aaPredicted RBP4.11□□□□□ -1.75
COPS3-209ENST00000486810 EPPINO95925 133 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 TCRAP04437 139 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 EFNA4P52798 201 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 ERVK-16P61578 105 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 GNB1P62873 340 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 PVRIGQ6DKI7 326 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 ATP5L2Q7Z4Y8 100 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 ZNF843Q8N446 348 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 SLC22A24Q8N4F4 322 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 C10orf105Q8TEF2 133 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 TMEM190Q8WZ59 177 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 DEFB127Q9H1M4 99 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 NXT2Q9NPJ8 142 aaKnown RBP4.11□□□□□ -1.75
COPS3-209ENST00000486810 RBM12B-AS1Q9P1G2 102 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 LINC00527Q9UJ94 153 aa4.11□□□□□ -1.75
COPS3-209ENST00000486810 RAI1Q7Z5J4 1906 aaPredicted RBP4.11□□□□□ -1.75
COPS3-209ENST00000486810 C17orf51A8MQB3 221 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 PRR32B1ATL7 298 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 C11orf94C9JXX5 98 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 SMKR1H3BMG3 65 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 NOVP48745 357 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 PSMB2P49721 201 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 TMEM52BQ4KMG9 183 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 FAM53AQ6NSI3 398 aaPredicted RBP4.1□□□□□ -1.75
COPS3-209ENST00000486810 FP248Q71RG6 208 aaPredicted RBP4.1□□□□□ -1.75
COPS3-209ENST00000486810 NOTCH2NLQ7Z3S9 236 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 CLECL1Q8IZS7 167 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 LY6G5BQ8NDX9 201 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 WFDC11Q8NEX6 87 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 C11orf52Q96A22 123 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 IFI27L1Q96BM0 104 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 PAXXQ9BUH6 204 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 PLEKHA3Q9HB20 300 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 EPDR1Q9UM22 224 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 WDR83OSQ9Y284 106 aa4.1□□□□□ -1.75
COPS3-209ENST00000486810 PTPRSQ13332 1948 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 GREB1Q4ZG55 1949 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 TDRD6O60522 2096 aaKnown RBP4.09□□□□□ -1.75
COPS3-209ENST00000486810 C19orf71A6NCJ1 209 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 PGPA6NDG6 321 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 K7ERJ3 54 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 CCL21O00585 134 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 SLC25A20O43772 301 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 IGKV1D-16P01601 117 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 SUB1P53999 127 aaKnown RBP eCLIP4.09□□□□□ -1.75
COPS3-209ENST00000486810 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.75
COPS3-209ENST00000486810 DAD1P61803 113 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 TMEM30BQ3MIR4 351 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 LYPD6Q86Y78 171 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 EEF1AKMT3Q96AZ1 226 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 LINC00597Q9H2U6 94 aa4.09□□□□□ -1.75
COPS3-209ENST00000486810 AGRNO00468 2067 aa4.09□□□□□ -1.76
COPS3-209ENST00000486810 TRBV7-3A0A075B6L6 115 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 TRBV25-1A0A075B6N4 114 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 UBE2L5PA0A1B0GUS4 154 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 SRRM4A7MD48 611 aaKnown RBP4.08□□□□□ -1.76
COPS3-209ENST00000486810 LOC730098B7Z3J9 87 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 NDUFB3O43676 98 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 NDUFS5O43920 106 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 BCE1O60756 84 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 LYPD3O95274 346 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 IGHV4-38-2P0DP08 117 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 ZNF823P16415 610 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 SAA4P35542 130 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 MYCNOSP40205 109 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 ZNF136P52737 540 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 ZNF56Q15929 161 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 CEMP1Q6PRD7 247 aaPredicted RBP4.08□□□□□ -1.76
COPS3-209ENST00000486810 LINC00173Q6ZV60 143 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 RPP25LQ8N5L8 163 aaKnown RBP4.08□□□□□ -1.76
COPS3-209ENST00000486810 GVQW1Q8N7I0 195 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 LIME1Q9H400 295 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 PCNX3Q9H6A9 2034 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 CALYQ9NYX4 217 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 OARD1Q9Y530 152 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 MYO16Q9Y6X6 1858 aa4.08□□□□□ -1.76
COPS3-209ENST00000486810 RALGAPA1Q6GYQ0 2036 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 NUP98P52948 1817 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 CYSRT1A8MQ03 144 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 C8orf87E5RJ46 101 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 INS-IGF2F8WCM5 200 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 IFI6P09912 130 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 FRMD6-AS1P0C7T7 363 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 IL9P15248 144 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 LMO2P25791 158 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 UBE2D1P51668 147 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 HERVK_113P61574 105 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 RPL18Q07020 188 aaKnown RBP4.07□□□□□ -1.76
COPS3-209ENST00000486810 ZNF816Q0VGE8 651 aaPredicted RBP4.07□□□□□ -1.76
COPS3-209ENST00000486810 CST6Q15828 149 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 ZNF876PQ49A33 203 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 ZNF542PQ5EBM4 170 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 SCGB1D4Q6XE38 83 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 WDR86Q86TI4 376 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 THAP8Q8NA92 274 aa4.07□□□□□ -1.76
COPS3-209ENST00000486810 FGFBP3Q8TAT2 258 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms