RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 SCRT2Q9NQ03 307 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 HLA-DRB4X5D2U9 266 aa8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 NYNRINQ9P2P1 1898 aaKnown RBP8.47□□□□□ -1.05
SRGAP3-207ENST00000485983 GPR179Q6PRD1 2367 aa8.46□□□□□ -1.05
SRGAP3-207ENST00000485983 IGHV3-38A0A0C4DH36 116 aa8.46□□□□□ -1.05
SRGAP3-207ENST00000485983 INAFM2P0DMQ5 153 aa8.46□□□□□ -1.05
SRGAP3-207ENST00000485983 RHOHQ15669 191 aa8.46□□□□□ -1.05
SRGAP3-207ENST00000485983 C5orf24Q7Z6I8 188 aa8.46□□□□□ -1.05
SRGAP3-207ENST00000485983 FREM3P0C091 2139 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 IGHV7-4-1A0A0J9YVY3 117 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 H3BUA1 57 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 ZFAND6Q6FIF0 208 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 C2orf66Q6UXQ4 117 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 ZNF833PQ6ZTB9 187 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 ATP6V0BQ99437 205 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 A0A1B0GW64 132 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 CRLF1O75462 422 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 DEFB112Q30KQ8 113 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 PRSS33Q8NF86 280 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 NDUFA4L2Q9NRX3 87 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 RALGAPA2Q2PPJ7 1873 aa8.46□□□□□ -1.06
SRGAP3-207ENST00000485983 CT83Q5H943 113 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 LINC00311Q8N616 119 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 KLHDC3Q9BQ90 382 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 C1orf43Q9BWL3 253 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 Q9HAA7 133 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 IGHV1-24A0A0C4DH33 117 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 CD5LO43866 347 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 GSN-AS1Q9NRJ2 163 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 LRRK1Q38SD2 2015 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 MED12Q93074 2177 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 IGLV3-9A0A075B6K5 115 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 A0A0J9YY99 117 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 TRBV19A0A075B6N1 114 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 SYS1-DBNDD2H3BUS1 97 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 ATRAIDQ6UW56 229 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 PIFOQ8TCI5 191 aa8.45□□□□□ -1.06
SRGAP3-207ENST00000485983 ZFHX2Q9C0A1 2572 aaPredicted RBP8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 LCTP09848 1927 aa8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 PRSS46E5RG02 174 aa8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 TMEM14BQ9NUH8 114 aa8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 ZNF492Q9P255 531 aa8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 IGKV1-39P01597 117 aa8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 IGKV1D-39P04432 117 aa8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 SRSF2Q01130 221 aaKnown RBP8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 TEX36Q5VZQ5 186 aa8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 hDV102S1A0JD36 115 aa8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 HIST1H2BLQ99880 126 aa8.44□□□□□ -1.06
SRGAP3-207ENST00000485983 UBL5Q9BZL1 73 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 TCF20Q9UGU0 1960 aaKnown RBP8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 FAM231BA6NCW3 169 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 IGHV4-59P01825 116 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 FOXI2Q6ZQN5 318 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 Q8N8P6 123 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 C8orf49Q96NF6 230 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 TMEM213A2RRL7 107 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 C9JAW5 83 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 GP9P14770 177 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 DSCR8Q96T75 97 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 NAA38Q9BRA0 125 aaKnown RBP8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 NOP10Q9NPE3 64 aaKnown RBP8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 HERVK_113P63121 156 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 LINC00479Q96M42 142 aa8.43□□□□□ -1.06
SRGAP3-207ENST00000485983 PCNX1Q96RV3 2341 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 NDUFS5O43920 106 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 SPART-AS1P0CW21 52 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 CLPSL2Q6UWE3 100 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 Q6ZR03 302 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 PIP4P1Q86T03 277 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 KLF2Q9Y5W3 355 aaPredicted RBP8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 IGHV2-5P01817 119 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 ZNF134P52741 427 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 A0A0G2JMZ2 1700 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 LRRC37A2A6NM11 1700 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 HAMPP81172 84 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 GREB1Q4ZG55 1949 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 A0A0G2JRQ6 117 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 IGLV2-23P01705 113 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 CXCL1P09341 107 aa8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 KLK5Q9Y337 293 aaPredicted RBP8.42□□□□□ -1.06
SRGAP3-207ENST00000485983 A0A087X0K7 114 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 C3orf79P0CE67 100 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 QRFPP83859 136 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 Q6ZRM9 215 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 MRPL53Q96EL3 112 aaKnown RBP8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 CYTL1Q9NRR1 136 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 FAM215AQ9Y5M1 114 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 C17orf58Q2M2W7 97 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 FAM120AOSQ5T036 256 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 ZNF503Q96F45 646 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 ZNF581Q9P0T4 197 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 NDUFA12Q9UI09 145 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 PRR25Q96S07 402 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 COL4A6Q14031 1691 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 MRPL23Q16540 153 aaKnown RBP8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 RNF144BQ7Z419 303 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 SH2D6Q7Z4S9 175 aa8.41□□□□□ -1.06
SRGAP3-207ENST00000485983 MUC6Q6W4X9 2439 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms