RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 NHLRC2Q8NBF2 726 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 ZNF738Q8NE65 137 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 DLX4Q92988 240 aaPredicted RBP7.23□□□□□ -1.25
CTSA-208ENST00000485627 DAZAP1Q96EP5 407 aaKnown RBP7.23□□□□□ -1.25
CTSA-208ENST00000485627 RAX2Q96IS3 184 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 NDFIP1Q9BT67 221 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 MLXQ9UH92 298 aa7.23□□□□□ -1.25
CTSA-208ENST00000485627 TRAV8-1A0A0A6YYK1 113 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 ZNF705FA8MVS1 300 aaPredicted RBP7.22□□□□□ -1.25
CTSA-208ENST00000485627 K7EN84 100 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 GCGP01275 180 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 CT45A10P0DMU9 189 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 OR5I1Q13606 314 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 SAPCD1Q5SSQ6 148 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 HIST2H2BDQ6DRA6 164 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 RBPMS2Q6ZRY4 209 aaKnown RBP7.22□□□□□ -1.25
CTSA-208ENST00000485627 NDUFA11Q86Y39 141 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 TMEM183AQ8IXX5 376 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 GBGT1Q8N5D6 347 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 RNF182Q8N6D2 247 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 URGCP-MRPS24S4R325 110 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 TGP01266 2768 aa7.22□□□□□ -1.25
CTSA-208ENST00000485627 TRAV8-2A0A0B4J237 113 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 RBAKDNA6NC62 111 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 ZNF705GA8MUZ8 300 aaPredicted RBP7.21□□□□□ -1.26
CTSA-208ENST00000485627 OVOL1O14753 267 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 GATCO43716 136 aaKnown RBP7.21□□□□□ -1.26
CTSA-208ENST00000485627 IGLV2-8P01709 118 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 EDN2P20800 178 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 TFPI2P48307 235 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 SNRPD3P62318 126 aaKnown RBP7.21□□□□□ -1.26
CTSA-208ENST00000485627 IBA57Q5T440 356 aaKnown RBP7.21□□□□□ -1.26
CTSA-208ENST00000485627 TMEM78Q5T7P6 136 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 OR10J6PQ8NGY7 276 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 MS4A6AQ9H2W1 248 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 OSTCQ9NRP0 149 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 SELENOKQ9Y6D0 94 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 MGAM2Q2M2H8 2515 aa7.21□□□□□ -1.26
CTSA-208ENST00000485627 SOCS3O14543 225 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 IGLV2-11P01706 119 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 CSN3P07498 182 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 PRB4P10163 310 aaPredicted RBP7.2□□□□□ -1.26
CTSA-208ENST00000485627 FHL3Q13643 280 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 FAM231DQ6ZW35 169 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 FAM24BQ8N5W8 94 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.2□□□□□ -1.26
CTSA-208ENST00000485627 BTF3L4Q96K17 158 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 IMMP2LQ96T52 175 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 VGLL1Q99990 258 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 MLST8Q9BVC4 326 aa7.2□□□□□ -1.26
CTSA-208ENST00000485627 RNASE7Q9H1E1 156 aaKnown RBP7.2□□□□□ -1.26
CTSA-208ENST00000485627 TENM1Q9UKZ4 2725 aa7.19□□□□□ -1.26
CTSA-208ENST00000485627 PRAC2D3DTV9 90 aa7.19□□□□□ -1.26
CTSA-208ENST00000485627 P01737 135 aa7.19□□□□□ -1.26
CTSA-208ENST00000485627 RPL19P84098 196 aaKnown RBP7.19□□□□□ -1.26
CTSA-208ENST00000485627 ERCC8Q13216 396 aa7.19□□□□□ -1.26
CTSA-208ENST00000485627 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
CTSA-208ENST00000485627 ZNF492Q9P255 531 aa7.19□□□□□ -1.26
CTSA-208ENST00000485627 COLCA2A8K830 154 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 K7EQG2 157 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
CTSA-208ENST00000485627 ZNF138P52744 262 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 ELOBQ15370 118 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 SMUG1Q53HV7 270 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 NUDT10Q8NFP7 164 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 OR4B1Q8NGF8 309 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 Q8TAT8 98 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 DCANP1Q8TF63 244 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 NUDT11Q96G61 164 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 LINC00477Q96M19 166 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 PRR25Q96S07 402 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 AGPAT4-IT1Q9H0P7 198 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 IL36BQ9NZH7 164 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 V9GYV3 84 aa7.18□□□□□ -1.26
CTSA-208ENST00000485627 TRAV2A0A0B4J234 112 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 TRAV25A0A0B4J276 109 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 A0A1W2PPQ1 181 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 PFN1P07737 140 aaKnown RBP7.17□□□□□ -1.26
CTSA-208ENST00000485627 ZNF688P0C7X2 276 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 KRTAP10-3P60369 221 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 HIST1H1AQ02539 215 aaPredicted RBP7.17□□□□□ -1.26
CTSA-208ENST00000485627 DEFB114Q30KQ6 69 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 PSMG4Q5JS54 123 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 EBLN2Q6P2I7 272 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 ADAMTSL5Q6ZMM2 481 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 C9orf47Q6ZRZ4 202 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 OR8A1Q8NGG7 326 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 ZC2HC1AQ96GY0 325 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 FAM210BQ96KR6 192 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 C8orf49Q96NF6 230 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 RPP21Q9H633 154 aaKnown RBP7.17□□□□□ -1.26
CTSA-208ENST00000485627 PPP1R14DQ9NXH3 145 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 SIGLEC8Q9NYZ4 499 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 LENEPQ9Y5L5 61 aa7.17□□□□□ -1.26
CTSA-208ENST00000485627 TRBV24-1A0A075B6N3 115 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 TRAV9-1A0A075B6T8 112 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 TGIF2-C20orf24A0A0A6YYL0 155 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 XKRY2A2RUG3 117 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 C19orf71A6NCJ1 209 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 OR4C46A6NHA9 309 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms