RNA–Protein interactions for RNA: ENST00000485155.1

MDH1-212, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-212ENST00000485155 RBM11P57052 281 aaKnown RBP3.4□□□□□ -1.87
MDH1-212ENST00000485155 LINC01547P58512 204 aaPredicted RBP3.4□□□□□ -1.87
MDH1-212ENST00000485155 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 UBE2D3P61077 147 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 UBE2D2P62837 147 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 RPS21P63220 83 aaKnown RBP3.4□□□□□ -1.87
MDH1-212ENST00000485155 MRPS36P82909 103 aaKnown RBP3.4□□□□□ -1.87
MDH1-212ENST00000485155 ZNF718Q3SXZ3 478 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 SP6Q3SY56 376 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 AMN1Q8IY45 258 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 OR5AS1Q8N127 324 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 ANKRD29Q8N6D5 301 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 CSNK1G2-AS1Q8NCQ2 148 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 IFI27L1Q96BM0 104 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 NPCDR1Q9BY65 106 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 MRPL20Q9BYC9 149 aaKnown RBP3.4□□□□□ -1.87
MDH1-212ENST00000485155 SLC25A22Q9H936 323 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 NHP2Q9NX24 153 aaKnown RBP3.4□□□□□ -1.87
MDH1-212ENST00000485155 HILPDAQ9Y5L2 63 aa3.4□□□□□ -1.87
MDH1-212ENST00000485155 SMCHD1A6NHR9 2005 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 OBSL1O75147 1896 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 NLRC5Q86WI3 1866 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 VWA8A3KMH1 1905 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 TRAV8-2A0A0B4J237 113 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 TRAV4A0A0B4J268 109 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 LMX1BO60663 402 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 IGKV1D-33P01593 117 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 IGKV1-33P01594 117 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 IGKV3-20P01619 116 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 P0DMU3 169 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 FAM231AP0DMU4 169 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 FAM231CP0DMU5 169 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 GCHFRP30047 84 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 SPINT3P49223 89 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 INSL3P51460 131 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 CACNG7P62955 275 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 PRR3P79522 188 aaKnown RBP3.39□□□□□ -1.87
MDH1-212ENST00000485155 EBI3Q14213 229 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 C1orf195Q5TG92 126 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 NOTCH2NLQ7Z3S9 236 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 C1orf158Q8N1D5 194 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 NKAPP1Q8N9T2 125 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 DCAF4L2Q8NA75 395 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 FAM57AQ8TBR7 257 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 DPH3Q96FX2 82 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 ZNF414Q96IQ9 312 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 BMFQ96LC9 184 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 FAM19A4Q96LR4 140 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 DEFB127Q9H1M4 99 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 FGF22Q9HCT0 170 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 LHFPL6Q9Y693 200 aa3.39□□□□□ -1.87
MDH1-212ENST00000485155 TNS1Q9HBL0 1735 aaKnown RBP3.39□□□□□ -1.87
MDH1-212ENST00000485155 COL16A1Q07092 1604 aaPredicted RBP3.38□□□□□ -1.87
MDH1-212ENST00000485155 TRPM6Q9BX84 2022 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 SCN3AQ9NY46 2000 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 TMED7-TICAM2A0A0A6YYA0 188 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 TRBV6-6A0A0A6YYG2 114 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 UBE2L5PA0A1B0GUS4 154 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 MYBPHLA2RUH7 354 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 H0Y9J4 135 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 IGKV1D-16P01601 117 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 CTLA4P16410 223 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 FXYD2P54710 66 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 FOXA3P55318 350 aaPredicted RBP3.38□□□□□ -1.87
MDH1-212ENST00000485155 KIAA0087Q14695 138 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 KISS1Q15726 138 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 CENPWQ5EE01 88 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 DEFB121Q5J5C9 76 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 TMEM86BQ8N661 226 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 CARD19Q96LW7 228 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 HDHD3Q9BSH5 251 aaPredicted RBP3.38□□□□□ -1.87
MDH1-212ENST00000485155 SLC25A39Q9BZJ4 359 aaPredicted RBP3.38□□□□□ -1.87
MDH1-212ENST00000485155 ZNF492Q9P255 531 aa3.38□□□□□ -1.87
MDH1-212ENST00000485155 COL4A1P02462 1669 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 COL4A2P08572 1712 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 TRBV25-1A0A075B6N4 114 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 IGHV3OR15-7A0A075B7D8 119 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 TRAV13-1A0A0B4J241 112 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 LINC01549A6NIU2 74 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 H3BT86 120 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 HBDP02042 147 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 PATE4P0C8F1 98 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 COL8A2P25067 703 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 DSCR4P56555 118 aaPredicted RBP3.37□□□□□ -1.87
MDH1-212ENST00000485155 FXYD4P59646 89 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 PPP1CAP62136 330 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 UBE2L3P68036 154 aaKnown RBP3.37□□□□□ -1.87
MDH1-212ENST00000485155 RPL18Q07020 188 aaKnown RBP3.37□□□□□ -1.87
MDH1-212ENST00000485155 PRR4Q16378 134 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 C2orf66Q6UXQ4 117 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 HMGN2P46Q86SG4 172 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 LINC00643Q86TS7 51 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 LINC00596Q86U02 117 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 GTSCR1Q86UQ5 136 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 RPS19BP1Q86WX3 136 aaKnown RBP3.37□□□□□ -1.87
MDH1-212ENST00000485155 C11orf72Q8NBR9 251 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 RNF185Q96GF1 192 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 METTL26Q96S19 204 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 TRGV9Q99603 122 aa3.37□□□□□ -1.87
MDH1-212ENST00000485155 KLF13Q9Y2Y9 288 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms