RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 TCF24Q7RTU0 167 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 REC114Q7Z4M0 266 aa12.7□□□□□ -0.38
CTSA-207ENST00000484855 TMEM213A2RRL7 107 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 SOCS3O14543 225 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 SRD5A1P18405 259 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 HOXD3P31249 432 aaPredicted RBP12.69□□□□□ -0.38
CTSA-207ENST00000484855 COX8CQ7Z4L0 72 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 GNB1LQ9BYB4 327 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 GPR61Q9BZJ8 451 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 GFRA4Q9GZZ7 299 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 MRPL18Q9H0U6 180 aaKnown RBP12.69□□□□□ -0.38
CTSA-207ENST00000484855 IGKV3-7A0A075B6H7 116 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 SYNJ2BPP57105 145 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 KHDC1LQ5JSQ8 128 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 ZNF738Q8NE65 137 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
CTSA-207ENST00000484855 A8MWP6 167 aa12.68□□□□□ -0.38
CTSA-207ENST00000484855 MT-ND6P03923 174 aa12.68□□□□□ -0.38
CTSA-207ENST00000484855 HOXA5P20719 270 aa12.68□□□□□ -0.38
CTSA-207ENST00000484855 FAM162BQ5T6X4 162 aa12.68□□□□□ -0.38
CTSA-207ENST00000484855 C18orf65Q6ZTR6 163 aa12.68□□□□□ -0.38
CTSA-207ENST00000484855 GTSF1Q8WW33 167 aa12.68□□□□□ -0.38
CTSA-207ENST00000484855 SELENOKQ9Y6D0 94 aa12.68□□□□□ -0.38
CTSA-207ENST00000484855 LGALS9O00182 355 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 RNASE1P07998 156 aaKnown RBP12.67□□□□□ -0.38
CTSA-207ENST00000484855 CDX1P47902 265 aaPredicted RBP12.67□□□□□ -0.38
CTSA-207ENST00000484855 RAB4BP61018 213 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 TMEM78Q5T7P6 136 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 TMEM136Q6ZRR5 245 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 ZNF418Q8TF45 676 aaPredicted RBP12.67□□□□□ -0.38
CTSA-207ENST00000484855 FAM231BA6NCW3 169 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 SH2D1AO60880 128 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 GZMBP10144 247 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 SMUG1Q53HV7 270 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 TCTEX1D4Q5JR98 221 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
CTSA-207ENST00000484855 XKRY2A2RUG3 117 aa12.66□□□□□ -0.38
CTSA-207ENST00000484855 DEFB136Q30KP8 78 aa12.66□□□□□ -0.38
CTSA-207ENST00000484855 RBPMS2Q6ZRY4 209 aaKnown RBP12.66□□□□□ -0.38
CTSA-207ENST00000484855 ATP5L2Q7Z4Y8 100 aa12.66□□□□□ -0.38
CTSA-207ENST00000484855 WIPF2Q8TF74 440 aaPredicted RBP12.66□□□□□ -0.38
CTSA-207ENST00000484855 C4orf3Q8WVX3 66 aa12.66□□□□□ -0.38
CTSA-207ENST00000484855 PGLYRP4Q96LB8 373 aa12.66□□□□□ -0.38
CTSA-207ENST00000484855 AGPAT4-IT1Q9H0P7 198 aa12.66□□□□□ -0.38
CTSA-207ENST00000484855 LY6G6DO95868 133 aa12.66□□□□□ -0.38
CTSA-207ENST00000484855 HLA-DQA1P01909 254 aa12.65□□□□□ -0.38
CTSA-207ENST00000484855 ZNF138P52744 262 aa12.65□□□□□ -0.38
CTSA-207ENST00000484855 C9orf47Q6ZRZ4 202 aa12.65□□□□□ -0.38
CTSA-207ENST00000484855 LINC01619G3V211 115 aa12.64□□□□□ -0.39
CTSA-207ENST00000484855 ZNF80P51504 273 aaPredicted RBP12.64□□□□□ -0.39
CTSA-207ENST00000484855 GFI1BQ5VTD9 330 aa12.64□□□□□ -0.39
CTSA-207ENST00000484855 SLURP1P55000 103 aa12.64□□□□□ -0.39
CTSA-207ENST00000484855 HILS1P60008 231 aa12.64□□□□□ -0.39
CTSA-207ENST00000484855 SAMD13Q5VXD3 122 aa12.64□□□□□ -0.39
CTSA-207ENST00000484855 KLHL30-AS1Q8NEE0 82 aa12.64□□□□□ -0.39
CTSA-207ENST00000484855 A0A1B0GXF2 115 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 TMEM189A5PLL7 270 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 OVOL1O14753 267 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 KLF5Q13887 457 aaPredicted RBP12.63□□□□□ -0.39
CTSA-207ENST00000484855 PDZD11Q5EBL8 140 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 OR11H1Q8NG94 326 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 DPF1Q92782 380 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 OTOGQ6ZRI0 2925 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 MTORP42345 2549 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 C2orf70A6NJV1 201 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 ZNF705DP0CH99 300 aaPredicted RBP12.63□□□□□ -0.39
CTSA-207ENST00000484855 ZNF705BP0CI00 300 aaPredicted RBP12.63□□□□□ -0.39
CTSA-207ENST00000484855 CAMPP49913 170 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 HBBP68871 147 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 HIST3H2BBQ8N257 126 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 OR10J6PQ8NGY7 276 aa12.63□□□□□ -0.39
CTSA-207ENST00000484855 TMSB15BA0A087X1C1 80 aa12.62□□□□□ -0.39
CTSA-207ENST00000484855 ID1P41134 155 aa12.62□□□□□ -0.39
CTSA-207ENST00000484855 FOXA3P55318 350 aaPredicted RBP12.62□□□□□ -0.39
CTSA-207ENST00000484855 COA6Q5JTJ3 125 aaKnown RBP12.62□□□□□ -0.39
CTSA-207ENST00000484855 DCANP1Q8TF63 244 aa12.62□□□□□ -0.39
CTSA-207ENST00000484855 PPP1R14DQ9NXH3 145 aa12.62□□□□□ -0.39
CTSA-207ENST00000484855 HIVEP2P31629 2446 aa12.62□□□□□ -0.39
CTSA-207ENST00000484855 GDF5OSQ5U4N7 250 aa12.62□□□□□ -0.39
CTSA-207ENST00000484855 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
CTSA-207ENST00000484855 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
CTSA-207ENST00000484855 C16orf95Q9H693 158 aa12.62□□□□□ -0.39
CTSA-207ENST00000484855 NF1P21359 2839 aa12.61□□□□□ -0.39
CTSA-207ENST00000484855 FABP5P3A8MUU1 101 aa12.61□□□□□ -0.39
CTSA-207ENST00000484855 M0QZ24 198 aa12.61□□□□□ -0.39
CTSA-207ENST00000484855 APCSP02743 223 aa12.61□□□□□ -0.39
CTSA-207ENST00000484855 Q6AWC8 147 aa12.61□□□□□ -0.39
CTSA-207ENST00000484855 HIST2H2BDQ6DRA6 164 aa12.61□□□□□ -0.39
CTSA-207ENST00000484855 DUX3Q96PT4 197 aa12.61□□□□□ -0.39
CTSA-207ENST00000484855 MS4A6AQ9H2W1 248 aa12.61□□□□□ -0.39
CTSA-207ENST00000484855 NOTCH2Q04721 2471 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 GRIFINA4D1Z8 144 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 S100A2P29034 98 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 DEFB1P60022 68 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 LINC01006Q8NI28 216 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 LINC00477Q96M19 166 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 S100A8P05109 93 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 CRISP2P16562 243 aa12.6□□□□□ -0.39
CTSA-207ENST00000484855 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms