RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 LINC00269Q8N2A0 174 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 C10orf111Q8N326 155 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 STX19Q8N4C7 294 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 FAM24BQ8N5W8 94 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 OR4B1Q8NGF8 309 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 CCL4L1Q8NHW4 92 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 ISOC1Q96CN7 298 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 BORCS8Q96FH0 119 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 OR4C12Q96R67 309 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 PLAC8Q9NZF1 115 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 NUBP2Q9Y5Y2 271 aa0.2□□□□□ -2.38
SCAF11-207ENST00000484275 ZNF142P52746 1687 aaPredicted RBP0.2□□□□□ -2.38
SCAF11-207ENST00000484275 KDM5CP41229 1560 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 TRDV1A0A1B0GX56 115 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 NUPR2A6NF83 97 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 A6NN06 94 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 TMEM238C9JI98 176 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 PPP5D1E7EU14 171 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 PFDN1O60925 122 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 MT-ND6P03923 174 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 GLRXP35754 106 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 MRPS36P82909 103 aaKnown RBP0.19□□□□□ -2.38
SCAF11-207ENST00000484275 DIAPH2-AS1Q14236 149 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 LTC4SQ16873 150 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 VMA21Q3ZAQ7 101 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 OCIAD2Q56VL3 154 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 C3orf33Q6P1S2 294 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 ZCCHC23Q6ZST2 131 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 OR5AK2Q8NH90 309 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 CDC26Q8NHZ8 85 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 GRPEL2Q8TAA5 225 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 DIRC1Q969H9 104 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 AP1S3Q96PC3 154 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 SMR3AQ99954 134 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 HOPXQ9BPY8 73 aaPredicted RBP0.19□□□□□ -2.38
SCAF11-207ENST00000484275 UFC1Q9Y3C8 167 aa0.19□□□□□ -2.38
SCAF11-207ENST00000484275 KNTC1P50748 2209 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 GABARAPH6UMI1 98 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 FAM107AO95990 144 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 IGHV3-30P01768 117 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 TRACP01848 142 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 PRH1P02810 166 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 SAA1P0DJI8 122 aaPredicted RBP0.18□□□□□ -2.38
SCAF11-207ENST00000484275 IGHV3-30-5P0DP03 117 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 NDUFA6P56556 154 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 FXYD4P59646 89 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 NEDD8Q15843 81 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 C6orf52Q5T4I8 152 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 TRIQKQ629K1 86 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 ANGPTL5Q86XS5 388 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 C5orf17Q8NAS9 161 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 OR5H6Q8NGV6 325 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 DYDC1Q8WWB3 177 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 CCL19Q99731 98 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 LIMD2Q9BT23 127 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 LPAR5Q9H1C0 372 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 LRTM1Q9HBL6 345 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 OTORQ9NRC9 128 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 GID8Q9NWU2 228 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 MED11Q9P086 117 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 LAMTOR2Q9Y2Q5 125 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 POLQO75417 2590 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 PLXNA1Q9UIW2 1896 aa0.18□□□□□ -2.38
SCAF11-207ENST00000484275 KIF13AQ9H1H9 1805 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 CDK12Q9NYV4 1490 aaPredicted RBP0.17□□□□□ -2.38
SCAF11-207ENST00000484275 HELZP42694 1942 aaKnown RBP0.17□□□□□ -2.38
SCAF11-207ENST00000484275 MAP1LC3B2A6NCE7 125 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 C5orf58C9J3I9 102 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 E7EQ34 232 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 SULT1C4O75897 302 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 BCL2P10415 239 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 FABP2P12104 132 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 TPT1P13693 172 aaKnown RBP0.17□□□□□ -2.38
SCAF11-207ENST00000484275 KDELR1P24390 212 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 SDC2P34741 201 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 SRP9P49458 86 aaKnown RBP0.17□□□□□ -2.38
SCAF11-207ENST00000484275 CRYBA4P53673 196 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 CAV3P56539 151 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 SPINK7P58062 85 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 MAXP61244 160 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 FAM135BQ49AJ0 1406 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 CCSMST1Q4G0I0 132 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 TMEM78Q5T7P6 136 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 DCUN1D2Q6PH85 259 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 C10orf99Q6UWK7 81 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 IZUMO2Q6UXV1 221 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 Q86TA4 180 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 STX12Q86Y82 276 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 CLEC2BQ92478 149 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 RMND5BQ96G75 393 aaPredicted RBP0.17□□□□□ -2.38
SCAF11-207ENST00000484275 PRELID3AQ96N28 172 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 CIB3Q96Q77 187 aaPredicted RBP0.17□□□□□ -2.38
SCAF11-207ENST00000484275 TANC1Q9C0D5 1861 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 TNS1Q9HBL0 1735 aaKnown RBP0.17□□□□□ -2.38
SCAF11-207ENST00000484275 TAF9BQ9HBM6 251 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 IL20Q9NYY1 176 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 NAT8BQ9UHF3 227 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 ATPIF1Q9UII2 106 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 CHD9Q3L8U1 2897 aa0.17□□□□□ -2.38
SCAF11-207ENST00000484275 ESPL1Q14674 2120 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms